RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 A0A1B0GU03 582 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 OOEPA6NGQ2 149 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 PRR33A8MZF0 331 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 AHRRA9YTQ3 701 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 RNASEK-C17orf49H0YIS7 233 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 CDX4O14627 284 aaPredicted RBP2.27□□□□□ -2.05
C9orf72-205ENST00000488117 AGPAT2O15120 278 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 LYZL6O75951 148 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 HAND1O96004 215 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SFTA3P0C7M3 94 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 VDAC1P21796 283 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 RAB5BP61020 215 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SUPT4H1P63272 117 aaKnown RBP2.27□□□□□ -2.05
C9orf72-205ENST00000488117 TGIF1Q15583 401 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 IGSF11Q5DX21 431 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 DPPA3Q6W0C5 159 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 RTN4RL2Q86UN3 420 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 CALHM1Q8IU99 346 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SELENOHQ8IZQ5 122 aaKnown RBP2.27□□□□□ -2.05
C9orf72-205ENST00000488117 OR2C3Q8N628 320 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SUMF1Q8NBK3 374 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 UBAC2Q8NBM4 344 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 HSD17B11Q8NBQ5 300 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 OR11L1Q8NGX0 322 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SLC25A40Q8TBP6 338 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 GALMQ96C23 342 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 WBP1Q96G27 269 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 MARS2Q96GW9 593 aaKnown RBP2.27□□□□□ -2.05
C9orf72-205ENST00000488117 AIFM2Q9BRQ8 373 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SPRY4Q9C004 299 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 KCNJ16Q9NPI9 418 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 TREM2Q9NZC2 230 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 NDRG3Q9UGV2 375 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 RNF150Q9ULK6 438 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 PPP1R3CQ9UQK1 317 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 LAMP3Q9UQV4 416 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 LIPGQ9Y5X9 500 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 KCNMB2Q9Y691 235 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 IGKV1D-8A0A087WSZ0 117 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 TRBV6-6A0A0A6YYG2 114 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 IGKV1-12A0A0C4DH73 117 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 NKX2-6A6NCS4 301 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 MPTX1A8MV57 137 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 TNFSF12O43508 249 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SYNGR1O43759 233 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SMPD2O60906 423 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 LY86O95711 162 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 NGFP01138 241 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 IGKV1D-12P01611 117 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 NPBWR2P48146 333 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 UCP2P55851 309 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 ERVK-16P61578 105 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 EWSR1Q01844 656 aaKnown RBP eCLIP2.27□□□□□ -2.05
C9orf72-205ENST00000488117 CLINT1Q14677 625 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 ZNF709Q8N972 641 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SCCPDHQ8NBX0 429 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 CLRN3Q8NCR9 226 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 OR51H1Q8NH63 302 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 ENY2Q9NPA8 101 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 CCL28Q9NRJ3 127 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SMCO4Q9NRQ5 59 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 UQCC1Q9NVA1 299 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 CACFD1Q9UGQ2 172 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 ERRFI1Q9UJM3 462 aaPredicted RBP2.27□□□□□ -2.05
C9orf72-205ENST00000488117 IQCF6A8MYZ5 107 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 C17orf112F2Z3M2 114 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 KCNAB3O43448 404 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 S100A6P06703 90 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SCTP09683 121 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 OMGP23515 440 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 CEACAM6P40199 344 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 TNFSF10P50591 281 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 FLI1Q01543 452 aaPredicted RBP2.27□□□□□ -2.05
C9orf72-205ENST00000488117 P2RY6Q15077 328 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 RSPO4Q2I0M5 234 aaPredicted RBP2.27□□□□□ -2.05
C9orf72-205ENST00000488117 TUSC1Q2TAM9 212 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 ATP1A1-AS1Q5TC04 95 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 Q6ZT83 130 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 TMPRSS7Q7RTY8 843 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 GCNT2Q8N0V5 402 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 OR8G5Q8NG78 346 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 MRPL30Q8TCC3 161 aaKnown RBP2.27□□□□□ -2.05
C9orf72-205ENST00000488117 GLYATL2Q8WU03 294 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 TMEM56Q96MV1 263 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 HS3ST6Q96QI5 342 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 ATP5SQ99766 215 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 GINS3Q9BRX5 216 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 OR2J1Q9GZK6 312 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 OR51I2Q9H344 312 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 ZNF552Q9H707 407 aaPredicted RBP2.27□□□□□ -2.05
C9orf72-205ENST00000488117 IFT22Q9H7X7 185 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 ZDHHC11Q9H8X9 412 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 RPS10P5Q9NQ39 176 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 DLL3Q9NYJ7 618 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 PSENENQ9NZ42 101 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 MTCH1Q9NZJ7 389 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 RCC2Q9P258 522 aaKnown RBP2.27□□□□□ -2.05
C9orf72-205ENST00000488117 SPRR3Q9UBC9 169 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 TMEM56-RWDD3S4R434 201 aa2.27□□□□□ -2.05
C9orf72-205ENST00000488117 TNRC6BQ9UPQ9 1833 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms