RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CHD9Q3L8U1 2897 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF610Q8N9Z0 462 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 AKR1E2Q96JD6 320 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 USB1Q9BQ65 265 aaKnown RBP11.42□□□□□ -0.58
HMGN1-216ENST00000486741 GCM1Q9NP62 436 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 RASL12Q9NYN1 266 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 PSENENQ9NZ42 101 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 GNG13Q9P2W3 67 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 CD74P04233 296 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 CHATP28329 748 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 UBE2KP61086 200 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 ERVS71-1P61550 626 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 AESQ08117 197 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 TUSC1Q2TAM9 212 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 MIDNQ504T8 468 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 LIAT1Q6ZQX7 453 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 FAM214BQ7L5A3 538 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 SLC35G3Q8N808 338 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 PURGQ9UJV8 347 aaKnown RBP11.42□□□□□ -0.58
HMGN1-216ENST00000486741 TMED3Q9Y3Q3 217 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 BPTFQ12830 3046 aa11.42□□□□□ -0.58
HMGN1-216ENST00000486741 TMEM30CPA0ZSE6 113 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 SOX15O60248 233 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 METTL15P1P0C7V9 234 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 CTRB1P17538 263 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 NKX6-1P78426 367 aaPredicted RBP11.41□□□□□ -0.58
HMGN1-216ENST00000486741 CTRB2Q6GPI1 263 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 FAM185AQ8N0U4 392 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 OR10Z1Q8NGY1 313 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 C14orf79Q96F83 325 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 TRDCB7Z8K6 153 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 OR2A4O95047 310 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 HOXA1P49639 335 aaPredicted RBP11.41□□□□□ -0.58
HMGN1-216ENST00000486741 SRSF6Q13247 344 aaKnown RBP11.41□□□□□ -0.58
HMGN1-216ENST00000486741 EIF2S3LQ2VIR3 472 aaKnown RBP11.41□□□□□ -0.58
HMGN1-216ENST00000486741 CEACAM21Q3KPI0 293 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 PDZD11Q5EBL8 140 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 WNT2BQ93097 391 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 OR2A7Q96R45 310 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 OR2D2Q9H210 308 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 UNKLQ9H9P5 680 aaKnown RBP11.41□□□□□ -0.58
HMGN1-216ENST00000486741 TUBG2Q9NRH3 451 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 CST4P01036 141 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 SNCAP37840 140 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 EIF2S3P41091 472 aaKnown RBP11.41□□□□□ -0.58
HMGN1-216ENST00000486741 RAB11AP62491 216 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 IZUMO4Q1ZYL8 232 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 OR2C3Q8N628 320 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 GMPPAQ96IJ6 420 aaPredicted RBP11.41□□□□□ -0.58
HMGN1-216ENST00000486741 NMES1Q9C002 83 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 PIEZO2Q9H5I5 2752 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 PTPRSQ13332 1948 aa11.41□□□□□ -0.58
HMGN1-216ENST00000486741 A0A0A6YYD4 124 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 ZNF716A6NP11 495 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 J3QT63 122 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 DTYMKP23919 212 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 PLGLAQ15195 96 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 Q3ZCU0 254 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 RXFP4Q8TDU9 374 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 ERGIC1Q969X5 290 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 PRR14LQ5THK1 2151 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 INTS1Q8N201 2190 aaKnown RBP11.4□□□□□ -0.58
HMGN1-216ENST00000486741 OR2B8PP59922 312 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 TLE4Q04727 773 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 ASPHD2Q6ICH7 369 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 TMEM211Q6ICI0 200 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 OVCH2Q7RTZ1 564 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 LIN7CQ9NUP9 197 aaKnown RBP11.4□□□□□ -0.58
HMGN1-216ENST00000486741 WNK2Q9Y3S1 2297 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 FREM1Q5H8C1 2179 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 MED13Q9UHV7 2174 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 IGHV3OR15-7A0A075B7D8 119 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 CLEC18AA5D8T8 446 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 LINC00862A6NCI5 91 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 RPL36A-HNRNPH2H7BZ11 118 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 S100PP25815 95 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 NHLH2Q02577 135 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 SURF2Q15527 256 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-216ENST00000486741 CLEC18CQ8NCF0 446 aa11.4□□□□□ -0.58
HMGN1-216ENST00000486741 E9PLN8 166 aa11.4□□□□□ -0.59
HMGN1-216ENST00000486741 M0R1X1 148 aa11.4□□□□□ -0.59
HMGN1-216ENST00000486741 CHST1O43916 411 aa11.4□□□□□ -0.59
HMGN1-216ENST00000486741 F12P00748 615 aaPredicted RBP11.4□□□□□ -0.59
HMGN1-216ENST00000486741 LPAR6P43657 344 aa11.4□□□□□ -0.59
HMGN1-216ENST00000486741 ADGRG7Q96K78 797 aa11.4□□□□□ -0.59
HMGN1-216ENST00000486741 CACNA1BQ00975 2339 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 LOC105371267A0A1B0GV96 52 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 CDRT15L2A8MXV6 281 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 ZNF883P0CG24 379 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 GNG10P50151 68 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 F2RL1P55085 397 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 KCNMB1Q16558 191 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 GGNQ86UU5 652 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 MRGPRFQ96AM1 343 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 IGKV1D-8A0A087WSZ0 117 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 UMAD1C9J7I0 102 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 DFFBO76075 338 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 CRYABP02511 175 aaKnown RBP11.39□□□□□ -0.59
HMGN1-216ENST00000486741 UCP2P55851 309 aa11.39□□□□□ -0.59
HMGN1-216ENST00000486741 ABCA1O95477 2261 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms