RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 LMO1P25800 156 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 CHRNB4P30926 498 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 RBMXP38159 391 aaKnown RBP14.07□□□□□ -0.16
CTSA-207ENST00000484855 SORDQ00796 357 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 MOGAT3Q86VF5 341 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 GAPTQ8N292 157 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 PRR7Q8TB68 274 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 ITLN1Q8WWA0 313 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 PIK3IP1Q96FE7 263 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 SEC22AQ96IW7 307 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 TRAPPC2LQ9UL33 140 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 FXYD6-FXYD2A0A087WZ82 144 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 RFPL4AA6NLU0 287 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 SRRM5B3KS81 715 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 RFPL4AL1F8VTS6 287 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 TSC22D2O75157 780 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 CD8AP01732 235 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 EGR1P18146 543 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 SERPINF1P36955 418 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 PHLDA2Q53GA4 152 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 SPRNQ5BIV9 151 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 ADAM5Q6NVV9 412 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 RSRP1Q9BUV0 290 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 SLC2A9Q9NRM0 540 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 COQ3Q9NZJ6 369 aa14.07□□□□□ -0.16
CTSA-207ENST00000484855 ICE1Q9Y2F5 2266 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 C5orf51A6NDU8 294 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 FGL1Q08830 312 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 GSG1LQ6UXU4 331 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 RTN4IP1Q8WWV3 396 aaPredicted RBP14.06□□□□□ -0.16
CTSA-207ENST00000484855 CABLES2Q9BTV7 478 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 NAA60Q9H7X0 242 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 RAB18Q9NP72 206 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 COMMD9Q9P000 198 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 PCDHB10Q9UN67 800 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 TRAV39A0A0B4J263 110 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 IFNL4K9M1U5 179 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 IGHV1-46P01743 117 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 TNFSF4P23510 183 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 SSTR2P30874 369 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 CFHR2P36980 270 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 TNFAIP6P98066 277 aaPredicted RBP14.06□□□□□ -0.16
CTSA-207ENST00000484855 BOLLQ8N9W6 283 aaKnown RBP14.06□□□□□ -0.16
CTSA-207ENST00000484855 KIRREL1Q96J84 757 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 ZDHHC8Q9ULC8 765 aa14.06□□□□□ -0.16
CTSA-207ENST00000484855 TRAV14DV4A0A0A6YYC5 116 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 C13orf42A0A1B0GVH6 325 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 TMEM30CPA0ZSE6 113 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 TMEM8BA6NDV4 472 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 ADAP1O75689 374 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 TUSC2O75896 110 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 TFF1P04155 84 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 OR4A8P0C604 315 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 GATA4P43694 442 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 COL10A1Q03692 680 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 ADIPOQQ15848 244 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 PCSK4Q6UW60 755 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 GCSAMQ8N6F7 178 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 CCDC71LQ8N9Z2 235 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 OR10J5Q8NHC4 309 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 SECTM1Q8WVN6 248 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 ESRP2Q9H6T0 727 aaKnown RBP14.05□□□□□ -0.16
CTSA-207ENST00000484855 DNAJB11Q9UBS4 358 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 IL19Q9UHD0 177 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 KCNIP3Q9Y2W7 256 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 WIPI2Q9Y4P8 454 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 TRBV6-7A0A0A0MS04 114 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 MED19A0JLT2 244 aaPredicted RBP14.05□□□□□ -0.16
CTSA-207ENST00000484855 HMSDA8MTL9 139 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 ARPC5O15511 151 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 FBXL19-AS1Q494R0 122 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 LRRC37A5PQ49AS3 106 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 FAM90A1Q86YD7 464 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 ZNF565Q8N9K5 539 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 KDF1Q8NAX2 398 aaPredicted RBP14.05□□□□□ -0.16
CTSA-207ENST00000484855 OR11L1Q8NGX0 322 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 IL1F10Q8WWZ1 152 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 RNASE6Q93091 150 aaKnown RBP14.05□□□□□ -0.16
CTSA-207ENST00000484855 METTL8Q9H825 291 aaKnown RBP14.05□□□□□ -0.16
CTSA-207ENST00000484855 MBNL3Q9NUK0 354 aaKnown RBP14.05□□□□□ -0.16
CTSA-207ENST00000484855 METRNQ9UJH8 293 aa14.05□□□□□ -0.16
CTSA-207ENST00000484855 CACNA1DQ01668 2161 aa14.04□□□□□ -0.16
CTSA-207ENST00000484855 KIAA2026Q5HYC2 2103 aa14.04□□□□□ -0.16
CTSA-207ENST00000484855 NKX2-6A6NCS4 301 aa14.04□□□□□ -0.16
CTSA-207ENST00000484855 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.04□□□□□ -0.16
CTSA-207ENST00000484855 L7N2F9 121 aa14.04□□□□□ -0.16
CTSA-207ENST00000484855 SNAPC5O75971 98 aa14.04□□□□□ -0.16
CTSA-207ENST00000484855 CXCL2P19875 107 aa14.04□□□□□ -0.16
CTSA-207ENST00000484855 KCNJ3P48549 501 aa14.04□□□□□ -0.16
CTSA-207ENST00000484855 ADORA2A-AS1P86434 159 aa14.04□□□□□ -0.16
CTSA-207ENST00000484855 PRR18Q8N4B5 295 aa14.04□□□□□ -0.16
CTSA-207ENST00000484855 PPP1R1CQ8WVI7 109 aa14.04□□□□□ -0.16
CTSA-207ENST00000484855 OR5AC1P0C628 307 aa14.03□□□□□ -0.16
CTSA-207ENST00000484855 PSG2P11465 335 aa14.03□□□□□ -0.16
CTSA-207ENST00000484855 OR3A1P47881 315 aa14.03□□□□□ -0.16
CTSA-207ENST00000484855 SNTB1Q13884 538 aaKnown RBP14.03□□□□□ -0.16
CTSA-207ENST00000484855 HMGN3Q15651 99 aa14.03□□□□□ -0.16
CTSA-207ENST00000484855 NCMAPQ5T1S8 102 aa14.03□□□□□ -0.16
CTSA-207ENST00000484855 SLC35E4Q6ICL7 350 aa14.03□□□□□ -0.16
CTSA-207ENST00000484855 CD177Q8N6Q3 437 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms