RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 MUL1Q969V5 352 aa8.13□□□□□ -1.11
CPSF4-213ENST00000484112 CHST6Q9GZX3 395 aa8.13□□□□□ -1.11
CPSF4-213ENST00000484112 SIRT7Q9NRC8 400 aa8.13□□□□□ -1.11
CPSF4-213ENST00000484112 NOTCH1P46531 2555 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 TRAV1-2A0A0B4J238 106 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 TRAV24A0A0B4J272 114 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 TRDV1A0A1B0GX56 115 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 ODAMA1E959 279 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 MAGEA13PA6NCF6 341 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 ZNF729A6NN14 1252 aaPredicted RBP8.12□□□□□ -1.11
CPSF4-213ENST00000484112 PDCD5O14737 125 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 SLC22A1O15245 554 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 OR7C1O76099 320 aaPredicted RBP8.12□□□□□ -1.11
CPSF4-213ENST00000484112 TNFAIP8O95379 198 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 IGHV1-8P0DP01 117 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 SERPINA2P20848 420 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 HTR2CP28335 458 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 GP2P55259 537 aaKnown RBP8.12□□□□□ -1.11
CPSF4-213ENST00000484112 SNU13P55769 128 aaKnown RBP8.12□□□□□ -1.11
CPSF4-213ENST00000484112 RPS25P62851 125 aaKnown RBP8.12□□□□□ -1.11
CPSF4-213ENST00000484112 FABP5Q01469 135 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 EDDM3AQ14507 147 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 ZNF273Q14593 569 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 SLC22A6Q4U2R8 563 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 PAN3Q58A45 887 aaKnown RBP8.12□□□□□ -1.11
CPSF4-213ENST00000484112 KRBOX4Q5JUW0 171 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 SLC35E4Q6ICL7 350 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 HEPN1Q6WQI6 88 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 RTN4RL2Q86UN3 420 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 OR11H6Q8NGC7 330 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 OR10A7Q8NGE5 316 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 OR4D6Q8NGJ1 314 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 KCNG3Q8TAE7 436 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 MRAPQ8TCY5 172 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 TMEM203Q969S6 136 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 ORAI1Q96D31 301 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 DPCDQ9BVM2 203 aaPredicted RBP8.12□□□□□ -1.11
CPSF4-213ENST00000484112 PPA2Q9H2U2 334 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 LINC00574Q9H8X3 128 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 RAB9BQ9NP90 201 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 RCC2Q9P258 522 aaKnown RBP8.12□□□□□ -1.11
CPSF4-213ENST00000484112 VPREB3Q9UKI3 123 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 SIGLEC9Q9Y336 463 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 TBL2Q9Y4P3 447 aaKnown RBP8.12□□□□□ -1.11
CPSF4-213ENST00000484112 SESN1Q9Y6P5 492 aa8.12□□□□□ -1.11
CPSF4-213ENST00000484112 A0A087X0M5 115 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 A0A1B0GX30 115 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 GEMIN2O14893 280 aaKnown RBP8.11□□□□□ -1.11
CPSF4-213ENST00000484112 TSPAN9O75954 239 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 PAHP00439 452 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 CALCBP10092 127 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 MGMTP16455 207 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 CCL3L1P16619 93 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 GZMHP20718 246 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 FGF9P31371 208 aaPredicted RBP8.11□□□□□ -1.11
CPSF4-213ENST00000484112 DLX1P56177 255 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 LGALS4P56470 323 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 SCN1BQ07699 218 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 AESQ08117 197 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 INSL4Q14641 139 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 HERPUD1Q15011 391 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 SSX1Q16384 188 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 PIGYQ3MUY2 71 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 SYT6Q5T7P8 510 aaPredicted RBP8.11□□□□□ -1.11
CPSF4-213ENST00000484112 SAMD5Q5TGI4 173 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 HCP5Q6MZN7 132 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 SLC16A12Q6ZSM3 486 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 TCF23Q7RTU1 214 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 OR2W3Q7Z3T1 314 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 TRAPPC6BQ86SZ2 158 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 SUMF2Q8NBJ7 301 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 BEND2Q8NDZ0 799 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 OR10K1Q8NGX5 313 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 OR5R1Q8NH85 324 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 CREB3L1Q96BA8 519 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 VCX3AQ9NNX9 186 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 ZNRD1Q9P1U0 126 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 FBLN5Q9UBX5 448 aa8.11□□□□□ -1.11
CPSF4-213ENST00000484112 A0A087WXM4 84 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 KBTBD11-OT1A0A1B0GTJ5 212 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 TMEM30CPA0ZSE6 113 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 MEIOCA2RUB1 952 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 MCRIP1C9JLW8 97 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 SLC17A2O00624 439 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 CRTAPO75718 401 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-213ENST00000484112 OPN1MWP04001 364 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 OPN1MW2P0DN77 364 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 OPN1MW3P0DN78 364 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 FUT3P21217 361 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 MYL9P24844 172 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 CALRP27797 417 aaKnown RBP8.1□□□□□ -1.11
CPSF4-213ENST00000484112 PSMB9P28065 219 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 CD34P28906 385 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 SAA4P35542 130 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 GLIPR1P48060 266 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 KLRD1Q13241 179 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 ATXN7L3Q14CW9 347 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-213ENST00000484112 TMEM30BQ3MIR4 351 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 FAM27D1Q5T7N8 215 aa8.1□□□□□ -1.11
CPSF4-213ENST00000484112 MINOS1Q5TGZ0 78 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms