RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 SOX6P35712 828 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 NPBWR2P48146 333 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 SERPINB10P48595 397 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 LSM3P62310 102 aaKnown RBP12.66□□□□□ -0.38
HDLBP-238ENST00000479894 BLMHQ13867 455 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 DEFB121Q5J5C9 76 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 ZNF788Q6ZQV5 615 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 WFDC9Q8NEX5 89 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 OR4D6Q8NGJ1 314 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 OR2T6Q8NHC8 308 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 AP3S1Q92572 193 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 FAM3DQ96BQ1 224 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 KCTD12Q96CX2 325 aaKnown RBP12.66□□□□□ -0.38
HDLBP-238ENST00000479894 ZNF488Q96MN9 340 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 MMP28Q9H239 520 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 PPA2Q9H2U2 334 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 CTSZQ9UBR2 303 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 OR14J1Q9UGF5 321 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 RAB22AQ9UL26 194 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 ST3GAL6Q9Y274 331 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 KPTNQ9Y664 436 aa12.66□□□□□ -0.38
HDLBP-238ENST00000479894 RYR2Q92736 4967 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 IGHV3OR15-7A0A075B7D8 119 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 METTL21EPA6NDL7 271 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 CCDC160A6NGH7 325 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 SIGLEC5O15389 551 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 HAND1O96004 215 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 GLAP06280 429 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 MGMTP16455 207 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 KCNJ3P48549 501 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 RORCP51449 518 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 RBM11P57052 281 aaKnown RBP12.65□□□□□ -0.38
HDLBP-238ENST00000479894 ARF6P62330 175 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 MXD1Q05195 221 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 DYNC1I2Q13409 638 aaKnown RBP12.65□□□□□ -0.38
HDLBP-238ENST00000479894 RBM39Q14498 530 aaKnown RBP12.65□□□□□ -0.38
HDLBP-238ENST00000479894 ARL6IP1Q15041 203 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 CTF1Q16619 201 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 SFXN4Q6P4A7 337 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 CRIP3Q6Q6R5 217 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 C1orf122Q6ZSJ8 110 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 SLC16A12Q6ZSM3 486 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 NDUFA11Q86Y39 141 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 OR4C13Q8NGP0 309 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 ACOT12Q8WYK0 555 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 R3HDM4Q96D70 268 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 SNX22Q96L94 193 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 TMEM59Q9BXS4 323 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 IFT22Q9H7X7 185 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 ABRACLQ9P1F3 81 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 SIGLEC9Q9Y336 463 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 ETV7Q9Y603 341 aa12.65□□□□□ -0.38
HDLBP-238ENST00000479894 IGKV1D-17A0A075B6S4 117 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 A0A1W2PPH5 198 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 ZNF44P15621 663 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 RAB6AP20340 208 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 CAV3P56539 151 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 VBP1P61758 197 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 IKZF1Q13422 519 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 NSUN5P1Q3KNT7 163 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 OR5T2Q8NGG2 359 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 SLC25A46Q96AG3 418 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 CCL13Q99616 98 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 SELENOIQ9C0D9 397 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 LIN7BQ9HAP6 207 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 DAPK2Q9UIK4 370 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 ZNF222Q9UK12 451 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 TENM2Q9NT68 2774 aa12.64□□□□□ -0.39
HDLBP-238ENST00000479894 DYNC2H1Q8NCM8 4307 aaKnown RBP12.64□□□□□ -0.39
HDLBP-238ENST00000479894 FBXO24O75426 580 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 OR7C1O76099 320 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-238ENST00000479894 CD33P20138 364 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 LMO1P25800 156 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 RPS19P39019 145 aaKnown RBP12.63□□□□□ -0.39
HDLBP-238ENST00000479894 NCS1P62166 190 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 GUCA2AQ02747 115 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 P2RY14Q15391 338 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 C2orf76Q3KRA6 126 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 IDNKQ5T6J7 187 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 HES5Q5TA89 166 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 MZT2AQ6P582 158 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 VMO1Q7Z5L0 202 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 PDZD9Q8IXQ8 264 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 ASCC1Q8N9N2 400 aaKnown RBP12.63□□□□□ -0.39
HDLBP-238ENST00000479894 C19orf18Q8NEA5 215 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 NEDD4LQ96PU5 975 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 GFI1Q99684 422 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 DCSTAMPQ9H295 470 aa12.63□□□□□ -0.39
HDLBP-238ENST00000479894 SLC25A10Q9UBX3 287 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-238ENST00000479894 TRBV23-1A0A0A0MS06 115 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 SHISA3A0PJX4 238 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 TMEM14DPA8MWL7 114 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 F8VVB4 439 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 F8VWA3 439 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 K7N7A8 449 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 DVL1O14640 695 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 MGST3O14880 152 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 CA11O75493 328 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 IGLL1P15814 213 aa12.62□□□□□ -0.39
HDLBP-238ENST00000479894 FUT3P21217 361 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms