RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 NCR3LG1Q68D85 454 aa21.92■■□□□ 1.1
CCM2-211ENST00000478582 SLC16A12Q6ZSM3 486 aa21.92■■□□□ 1.1
CCM2-211ENST00000478582 GPR141Q7Z602 305 aa21.92■■□□□ 1.1
CCM2-211ENST00000478582 NEDD4LQ96PU5 975 aa21.92■■□□□ 1.1
CCM2-211ENST00000478582 DSCAML1Q8TD84 2053 aa21.92■■□□□ 1.1
CCM2-211ENST00000478582 MEIKINA0A087WXM9 373 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 CA11O75493 328 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 CGB3P0DN86 165 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 CGB7P0DN87 165 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 RAB6AP20340 208 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 GUCA2AQ02747 115 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 ZNF497Q6ZNH5 498 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 TRAPPC6BQ86SZ2 158 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 GAPTQ8N292 157 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 ZNF565Q8N9K5 539 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 ING3Q9NXR8 418 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 ZNF69Q9UC07 566 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 DAPK2Q9UIK4 370 aa21.91■■□□□ 1.1
CCM2-211ENST00000478582 IGHV1-69DA0A0B4J2H0 117 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 TMEM30CPA0ZSE6 113 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 MEX3AA1L020 520 aaKnown RBP21.9■■□□□ 1.1
CCM2-211ENST00000478582 FOXI3A8MTJ6 420 aaPredicted RBP21.9■■□□□ 1.1
CCM2-211ENST00000478582 RNASEK-C17orf49H0YIS7 233 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 GABARAPO95166 117 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 VENTXO95231 258 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 IL1AP01583 271 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 IGHV1-69P01742 117 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 FPR2P25090 351 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 RPL5P46777 297 aaKnown RBP21.9■■□□□ 1.1
CCM2-211ENST00000478582 ERVFRD-1P60508 538 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 FAM189A2Q15884 450 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 USP43Q70EL4 1123 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 CROCCP3Q8IVE0 287 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 NEK7Q8TDX7 302 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 GAL3ST2Q9H3Q3 398 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 HEXA-AS1Q9H8Q6 139 aa21.9■■□□□ 1.1
CCM2-211ENST00000478582 IGHV3OR16-10A0A075B7F0 116 aa21.89■■□□□ 1.09
CCM2-211ENST00000478582 A0A0B4J203 849 aa21.89■■□□□ 1.09
CCM2-211ENST00000478582 ZNF729A6NN14 1252 aaPredicted RBP21.89■■□□□ 1.09
CCM2-211ENST00000478582 MT-ND4P03905 459 aa21.89■■□□□ 1.09
CCM2-211ENST00000478582 BLVRBP30043 206 aaPredicted RBP21.89■■□□□ 1.09
CCM2-211ENST00000478582 RPS19P39019 145 aaKnown RBP21.89■■□□□ 1.09
CCM2-211ENST00000478582 UBE2E1P51965 193 aa21.89■■□□□ 1.09
CCM2-211ENST00000478582 SCAND1P57086 179 aa21.89■■□□□ 1.09
CCM2-211ENST00000478582 PLA2G7Q13093 441 aa21.89■■□□□ 1.09
CCM2-211ENST00000478582 HCP5Q6MZN7 132 aa21.89■■□□□ 1.09
CCM2-211ENST00000478582 MS4A7Q9GZW8 240 aaPredicted RBP21.89■■□□□ 1.09
CCM2-211ENST00000478582 ETAA1Q9NY74 926 aa21.89■■□□□ 1.09
CCM2-211ENST00000478582 HSF4Q9ULV5 492 aa21.89■■□□□ 1.09
CCM2-211ENST00000478582 SOCS1O15524 211 aa21.88■■□□□ 1.09
CCM2-211ENST00000478582 IGHV1-8P0DP01 117 aa21.88■■□□□ 1.09
CCM2-211ENST00000478582 EFNB2P52799 333 aa21.88■■□□□ 1.09
CCM2-211ENST00000478582 DLX1P56177 255 aa21.88■■□□□ 1.09
CCM2-211ENST00000478582 NCS1P62166 190 aa21.88■■□□□ 1.09
CCM2-211ENST00000478582 CTF1Q16619 201 aa21.88■■□□□ 1.09
CCM2-211ENST00000478582 GPR107Q5VW38 600 aa21.88■■□□□ 1.09
CCM2-211ENST00000478582 OR56B1Q8NGI3 324 aa21.88■■□□□ 1.09
CCM2-211ENST00000478582 OR13A1Q8NGR1 328 aa21.88■■□□□ 1.09
CCM2-211ENST00000478582 NAA50Q9GZZ1 169 aaKnown RBP21.88■■□□□ 1.09
CCM2-211ENST00000478582 LINC00574Q9H8X3 128 aa21.88■■□□□ 1.09
CCM2-211ENST00000478582 VEGFCP49767 419 aa21.87■■□□□ 1.09
CCM2-211ENST00000478582 TMEM50BP56557 158 aa21.87■■□□□ 1.09
CCM2-211ENST00000478582 VBP1P61758 197 aa21.87■■□□□ 1.09
CCM2-211ENST00000478582 C17orf58Q2M2W7 97 aa21.87■■□□□ 1.09
CCM2-211ENST00000478582 NKAPLQ5M9Q1 402 aa21.87■■□□□ 1.09
CCM2-211ENST00000478582 HEPN1Q6WQI6 88 aa21.87■■□□□ 1.09
CCM2-211ENST00000478582 BRD3OSQ6XYD6 125 aa21.87■■□□□ 1.09
CCM2-211ENST00000478582 C6orf201Q7Z4U5 140 aa21.87■■□□□ 1.09
CCM2-211ENST00000478582 SULT4A1Q9BR01 284 aa21.87■■□□□ 1.09
CCM2-211ENST00000478582 PLEKHJ1Q9NW61 149 aa21.87■■□□□ 1.09
CCM2-211ENST00000478582 SCOCQ9UIL1 159 aa21.87■■□□□ 1.09
CCM2-211ENST00000478582 KBTBD11-OT1A0A1B0GTJ5 212 aa21.86■■□□□ 1.09
CCM2-211ENST00000478582 UBE2QL1A1L167 161 aa21.86■■□□□ 1.09
CCM2-211ENST00000478582 CLPXO76031 633 aa21.86■■□□□ 1.09
CCM2-211ENST00000478582 GZMHP20718 246 aa21.86■■□□□ 1.09
CCM2-211ENST00000478582 HILS1P60008 231 aa21.86■■□□□ 1.09
CCM2-211ENST00000478582 KLRD1Q13241 179 aa21.86■■□□□ 1.09
CCM2-211ENST00000478582 IDNKQ5T6J7 187 aa21.86■■□□□ 1.09
CCM2-211ENST00000478582 BCL6BQ8N143 479 aaPredicted RBP21.86■■□□□ 1.09
CCM2-211ENST00000478582 ZFAND2BQ8WV99 257 aa21.86■■□□□ 1.09
CCM2-211ENST00000478582 FAAP24Q9BTP7 215 aa21.86■■□□□ 1.09
CCM2-211ENST00000478582 SUCNR1Q9BXA5 334 aa21.86■■□□□ 1.09
CCM2-211ENST00000478582 SESN1Q9Y6P5 492 aa21.86■■□□□ 1.09
CCM2-211ENST00000478582 STAB1Q9NY15 2570 aa21.85■■□□□ 1.09
CCM2-211ENST00000478582 GLP1RP43220 463 aa21.85■■□□□ 1.09
CCM2-211ENST00000478582 PRB3Q04118 309 aaPredicted RBP21.85■■□□□ 1.09
CCM2-211ENST00000478582 RUSC1-AS1Q66K80 236 aa21.85■■□□□ 1.09
CCM2-211ENST00000478582 PDZD9Q8IXQ8 264 aa21.85■■□□□ 1.09
CCM2-211ENST00000478582 C22orf15Q8WYQ4 148 aa21.85■■□□□ 1.09
CCM2-211ENST00000478582 DYRK2Q92630 601 aa21.85■■□□□ 1.09
CCM2-211ENST00000478582 CYYR1Q96J86 154 aa21.85■■□□□ 1.09
CCM2-211ENST00000478582 JMJD8Q96S16 334 aa21.85■■□□□ 1.09
CCM2-211ENST00000478582 SLC6A7Q99884 636 aa21.85■■□□□ 1.09
CCM2-211ENST00000478582 METTL21EPA6NDL7 271 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 NPIPB11E5RHQ5 1161 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 MMP23AO75900 390 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 SNRPBP14678 240 aaKnown RBP21.84■■□□□ 1.09
CCM2-211ENST00000478582 SERPINB10P48595 397 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 OR52W1Q6IF63 320 aa21.84■■□□□ 1.09
CCM2-211ENST00000478582 ZNF782Q6ZMW2 699 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms