RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 GUK1Q16774 197 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 BTNL3Q6UXE8 466 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 AKR1E2Q96JD6 320 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 ZFHX2Q9C0A1 2572 aaPredicted RBP12.36□□□□□ -0.43
NPHP4-208ENST00000478423 SHISA3A0PJX4 238 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 RNASEK-C17orf49H0YIS7 233 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 ZNF883P0CG24 379 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 CLEC9AQ6UXN8 241 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 ETV3LQ6ZN32 361 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 RNF7Q9UBF6 113 aa12.36□□□□□ -0.43
NPHP4-208ENST00000478423 MED13LQ71F56 2210 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 PRR33A8MZF0 331 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 PPP1R2P9O14990 202 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 UCP2P55851 309 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 TAGLNQ01995 201 aaKnown RBP12.35□□□□□ -0.43
NPHP4-208ENST00000478423 PJVKQ0ZLH3 352 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 LYZL2Q7Z4W2 148 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 TMEM56Q96MV1 263 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 OOEPA6NGQ2 149 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 AHRRA9YTQ3 701 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 ENDOGQ14249 297 aaKnown RBP12.35□□□□□ -0.43
NPHP4-208ENST00000478423 CLEC12BQ2HXU8 276 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 SNAI3Q3KNW1 292 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 C9orf62Q8N4C0 152 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 NMES1Q9C002 83 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 GHITMQ9H3K2 345 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 HES4Q9HCC6 221 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 CEACAM21Q3KPI0 293 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 ZBTB44Q8NCP5 570 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 ZNRF4Q8WWF5 429 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 RAB1CQ92928 201 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 ALX4Q9H161 411 aaPredicted RBP12.35□□□□□ -0.43
NPHP4-208ENST00000478423 VSIG4Q9Y279 399 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 OR2W1Q9Y3N9 320 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 RPL36A-HNRNPH2H7BZ11 118 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 SYNGR2O43760 224 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 CLEC3BP05452 202 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 HLA-DRB3P79483 266 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 AESQ08117 197 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 LGALSLQ3ZCW2 172 aaPredicted RBP12.35□□□□□ -0.43
NPHP4-208ENST00000478423 AP1S3Q96PC3 154 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 LRFN3Q9BTN0 628 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 OPN3Q9H1Y3 402 aaPredicted RBP12.35□□□□□ -0.43
NPHP4-208ENST00000478423 MS4A5Q9H3V2 200 aa12.35□□□□□ -0.43
NPHP4-208ENST00000478423 EP400Q96L91 3159 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 TCF20Q9UGU0 1960 aaKnown RBP12.34□□□□□ -0.43
NPHP4-208ENST00000478423 NCBP2LA6PVI3 153 aaKnown RBP12.34□□□□□ -0.43
NPHP4-208ENST00000478423 AKR1C3P42330 323 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 ZNF260Q3ZCT1 412 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 MRPL14Q6P1L8 145 aaKnown RBP12.34□□□□□ -0.43
NPHP4-208ENST00000478423 BAGE3Q86Y29 109 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 BAGE2Q86Y30 109 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 NECAP1Q8NC96 275 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 TMEM230Q96A57 120 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 PHYHIPLQ96FC7 376 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 CABLES2Q9BTV7 478 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 G6PC2Q9NQR9 355 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 CA10Q9NS85 328 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 CHST1O43916 411 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 HNF1AP20823 631 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 BPIFB3P59826 476 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 KHDC1LQ5JSQ8 128 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 PRR7Q8TB68 274 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 RAB1BQ9H0U4 201 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 SIP14410 1827 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 OR5H1A6NKK0 313 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 SOX15O60248 233 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 FCGR3AP08637 254 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 CCL8P80075 99 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 TLE1Q04724 770 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 TPRX1Q8N7U7 411 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 IMMP1LQ96LU5 166 aa12.34□□□□□ -0.43
NPHP4-208ENST00000478423 IGLV3-12A0A075B6K2 115 aa12.33□□□□□ -0.43
NPHP4-208ENST00000478423 RPS2P15880 293 aaKnown RBP12.33□□□□□ -0.43
NPHP4-208ENST00000478423 ARTNQ5T4W7 220 aa12.33□□□□□ -0.43
NPHP4-208ENST00000478423 FDX2Q6P4F2 183 aa12.33□□□□□ -0.43
NPHP4-208ENST00000478423 TMEM105Q8N8V8 129 aa12.33□□□□□ -0.43
NPHP4-208ENST00000478423 C2CD4CQ8TF44 421 aa12.33□□□□□ -0.43
NPHP4-208ENST00000478423 NOTCH3Q9UM47 2321 aa12.33□□□□□ -0.43
NPHP4-208ENST00000478423 COX7A2P2O60397 106 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 OR4S2Q8NH73 311 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 MRGPRFQ96AM1 343 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 SIGLEC12Q96PQ1 595 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 MESP1Q9BRJ9 268 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 SLC35D1Q9NTN3 355 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 WSB1Q9Y6I7 421 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 THSD7BQ9C0I4 1608 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 VSIG10L2P0DP72 767 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 CFHR1Q03591 330 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 FDCSPQ8NFU4 85 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 RNF122Q9H9V4 155 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 TMEM210A6NLX4 147 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 CT45A10P0DMU9 189 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 CSN1S1P47710 185 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 FFAR4Q5NUL3 377 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 COMMD1Q8N668 190 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 GPR137Q96N19 417 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 TUBG2Q9NRH3 451 aa12.33□□□□□ -0.44
NPHP4-208ENST00000478423 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.32□□□□□ -0.447e-7■■■■□ 24.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms