RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 NDUFA13Q9P0J0 144 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 COMMD3Q9UBI1 195 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 AK3Q9UIJ7 227 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 KIF25Q9UIL4 384 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 STAB1Q9NY15 2570 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 IGKV1D-8A0A087WSZ0 117 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 TRBV23-1A0A0A0MS06 115 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 TRBV6-6A0A0A6YYG2 114 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 ODAMA1E959 279 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 UBE2QL1A1L167 161 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 C17orf98A8MV24 154 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 TGFAP01135 160 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 GNB3P16520 340 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 RCC1P18754 421 aaPredicted RBP8.5□□□□□ -1.05
CASC3-204ENST00000474190 RPL31P62899 125 aaKnown RBP8.5□□□□□ -1.05
CASC3-204ENST00000474190 PRB3Q04118 309 aaPredicted RBP8.5□□□□□ -1.05
CASC3-204ENST00000474190 EDDM3AQ14507 147 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 KLF17Q5JT82 389 aaPredicted RBP8.5□□□□□ -1.05
CASC3-204ENST00000474190 UBE2NLQ5JXB2 153 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 NKAPLQ5M9Q1 402 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 ATAD3CQ5T2N8 411 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 CYB5R2Q6BCY4 276 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 FIP1L1Q6UN15 594 aaKnown RBP8.5□□□□□ -1.05
CASC3-204ENST00000474190 IZUMO1Q8IYV9 350 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 OR56B1Q8NGI3 324 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 OR5D13Q8NGL4 314 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 ACOT12Q8WYK0 555 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 AJUBAQ96IF1 538 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 CMTM3Q96MX0 182 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 URM1Q9BTM9 101 aaKnown RBP8.5□□□□□ -1.05
CASC3-204ENST00000474190 SPACA1Q9HBV2 294 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 MBNL3Q9NUK0 354 aaKnown RBP8.5□□□□□ -1.05
CASC3-204ENST00000474190 HIVEP2P31629 2446 aa8.5□□□□□ -1.05
CASC3-204ENST00000474190 TRAV20A0A0B4J274 112 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 CCDC160A6NGH7 325 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 NPIPB11E5RHQ5 1161 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 XRCC3O43542 346 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 ECDO95905 644 aaPredicted RBP8.49□□□□□ -1.05
CASC3-204ENST00000474190 APOA1P02647 267 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 PPIAL4GP0DN37 164 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 MNDAP41218 407 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 KCNJ3P48549 501 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 MEF2CQ06413 473 aaPredicted RBP8.49□□□□□ -1.05
CASC3-204ENST00000474190 CNPY1Q3B7I2 92 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 CDNFQ49AH0 187 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 KRBOX4Q5JUW0 171 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 LDLRAD2Q5SZI1 272 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 Q6ZTK2 550 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 GCDHQ92947 438 aaPredicted RBP8.49□□□□□ -1.05
CASC3-204ENST00000474190 RAB3CQ96E17 227 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 DMRTB1Q96MA1 342 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 ATG5Q9H1Y0 275 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 AUNIPQ9H7T9 357 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 UNKLQ9H9P5 680 aaKnown RBP8.49□□□□□ -1.05
CASC3-204ENST00000474190 ETAA1Q9NY74 926 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 GLS2Q9UI32 602 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 LINC00312Q9Y6C7 94 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 A3GALT2U3KPV4 340 aa8.49□□□□□ -1.05
CASC3-204ENST00000474190 A0A0A6YYH2 397 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 IGKV1-6A0A0C4DH72 117 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 MEIOCA2RUB1 952 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 TMEM235A6NFC5 223 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 A6NJ64 397 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 MCRIP1C9JLW8 97 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 ENSAO43768 121 aaKnown RBP8.48□□□□□ -1.05
CASC3-204ENST00000474190 CA11O75493 328 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 SSTR5P35346 364 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 EDDM3BP56851 147 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 TAS2R20P59543 309 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 ARF6P62330 175 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 HACD4Q5VWC8 232 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 CD276Q5ZPR3 534 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 C1orf122Q6ZSJ8 110 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 GDPD3Q7L5L3 318 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 KIR3DL3Q8N743 410 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 OR4K15Q8NH41 348 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 MRGPRDQ8TDS7 321 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 H1FXQ92522 213 aaKnown RBP8.48□□□□□ -1.05
CASC3-204ENST00000474190 WDFY2Q96P53 400 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 NEDD4LQ96PU5 975 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 ABHD1Q96SE0 405 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 BATF3Q9NR55 127 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 PLEKHJ1Q9NW61 149 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 ING3Q9NXR8 418 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 ANAPC10Q9UM13 185 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 SOX21Q9Y651 276 aaPredicted RBP8.48□□□□□ -1.05
CASC3-204ENST00000474190 V9GYH0 126 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 JMJD1CQ15652 2540 aa8.48□□□□□ -1.05
CASC3-204ENST00000474190 FBN1P35555 2871 aaKnown RBP8.47□□□□□ -1.05
CASC3-204ENST00000474190 WNK2Q9Y3S1 2297 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 TRAV18A0A075B6X5 111 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 MEIKINA0A087WXM9 373 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 KBTBD11-OT1A0A1B0GTJ5 212 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 TMEM30CPA0ZSE6 113 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 METTL21EPA6NDL7 271 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 C12orf77C9JDV5 145 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 RNASEK-C17orf49H0YIS7 233 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 M0R1W7 72 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 HEXAP06865 529 aa8.47□□□□□ -1.05
CASC3-204ENST00000474190 LIPFP07098 398 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms