RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 H3BUI4 141 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 MRPS14O60783 128 aaKnown RBP11.54□□□□□ -0.56
VAMP4-203ENST00000474047 MMP23AO75900 390 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 MDKP21741 143 aaPredicted RBP11.54□□□□□ -0.56
VAMP4-203ENST00000474047 PAX6P26367 422 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 PRRX1P54821 245 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 SLC35E4Q6ICL7 350 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 LRRTM1Q86UE6 522 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 PLPPR1Q8TBJ4 325 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 ZNF596Q8TC21 504 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 MRGPRDQ8TDS7 321 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 FAM46BQ96A09 425 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 YTHDF1Q9BYJ9 559 aaKnown RBP11.54□□□□□ -0.56
VAMP4-203ENST00000474047 NCOR1P1Q9H4R4 102 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 PLGRKTQ9HBL7 147 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 C1RLQ9NZP8 487 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 ZNF581Q9P0T4 197 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 HILPDAQ9Y5L2 63 aa11.54□□□□□ -0.56
VAMP4-203ENST00000474047 POM121CA8CG34 1229 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 ODF3BA8MYP8 253 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 HTR1DP28221 377 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 HTR2CP28335 458 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 GABRA5P31644 462 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 GP2P55259 537 aaKnown RBP11.53□□□□□ -0.56
VAMP4-203ENST00000474047 EMX1Q04741 257 aaPredicted RBP11.53□□□□□ -0.56
VAMP4-203ENST00000474047 AANATQ16613 207 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 MINOS1Q5TGZ0 78 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 RSBN1Q5VWQ0 802 aaPredicted RBP11.53□□□□□ -0.56
VAMP4-203ENST00000474047 RAB12Q6IQ22 244 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 OR13A1Q8NGR1 328 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 CALYQ9NYX4 217 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 PEX16Q9Y5Y5 336 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 MINOS1-NBL1R4GNA1 71 aa11.53□□□□□ -0.56
VAMP4-203ENST00000474047 TRAV39A0A0B4J263 110 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 FAM90A8PA6NJQ4 464 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 SC5DO75845 299 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 NDUFA7O95182 113 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 MPIG6BO95866 241 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 GZMHP20718 246 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 CALRP27797 417 aaKnown RBP11.52□□□□□ -0.56
VAMP4-203ENST00000474047 FABP5Q01469 135 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 LTC4SQ16873 150 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 TMEM91Q6ZNR0 172 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 TMEM104Q8NE00 496 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 CCDC107Q8WV48 283 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 AJUBAQ96IF1 538 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 RAB18Q9NP72 206 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 LRRC42Q9Y546 428 aa11.52□□□□□ -0.56
VAMP4-203ENST00000474047 FAM90A10PA6NDY2 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A18PA6NE21 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A16PA6NEW6 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A20PA6NIJ5 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A7PA6NKC0 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A22PA8MWA6 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A12PA8MX19 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A5PA8MXJ8 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A23PA8MXZ1 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 AIPO00170 330 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A15PP0C7V4 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A13PP0C7W8 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A14PP0C7W9 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FAM90A24PP0C7X0 464 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 FUT3P21217 361 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 CEACAM3P40198 252 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 RANBP1P43487 201 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 ARHGDIBP52566 201 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 C1orf100Q5SVJ3 147 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 BAIAP2L2Q6UXY1 529 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 LYPD6Q86Y78 171 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 OR6M1Q8NGM8 313 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 RFESDQ8TAC1 157 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 KCNG3Q8TAE7 436 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 CREB3L1Q96BA8 519 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 NEDD4LQ96PU5 975 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 ZNF747Q9BV97 191 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 ETAA1Q9NY74 926 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 IDI2-AS1Q9NZ38 188 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 TRAPPC2LQ9UL33 140 aa11.52□□□□□ -0.57
VAMP4-203ENST00000474047 AK6Q9Y3D8 172 aaKnown RBP11.52□□□□□ -0.57
VAMP4-203ENST00000474047 LEUTXA8MZ59 168 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 F2RL2O00254 374 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 IL1AP01583 271 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 PSMB9P28065 219 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 GDNFP39905 211 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 RAB13P51153 203 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 PSMD7P51665 324 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 PAX5Q02548 391 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 SHISA2Q6UWI4 295 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 DYNAPQ8N1N2 210 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 ARL11Q969Q4 196 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 Q96M66 194 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 TMEM59Q9BXS4 323 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 ZNF286AQ9HBT8 521 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 DPM3Q9P2X0 92 aa11.51□□□□□ -0.57
VAMP4-203ENST00000474047 UBE2QL1A1L167 161 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 CLPSL1A2RUU4 121 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 RELBQ01201 579 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 RAB11BQ15907 218 aa11.5□□□□□ -0.57
VAMP4-203ENST00000474047 NKAPLQ5M9Q1 402 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms