RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 A0A1B0GTI1 187 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 hCG_38984A0A1B0GV85 526 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SPAARA0A1B0GVQ0 90 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 LINC00854A0A1B0GVQ3 168 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 LOC390937A0A1W2PQ73 354 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 DAPL1A0PJW8 107 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 CIB4A0PJX0 185 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ISPDA4D126 451 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 MEIS3P1A6NDR6 274 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 TRABD2BA6NFA1 517 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SNTNA6NMZ2 147 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF716A6NP11 495 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF879B4DU55 563 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF732B4DXR9 585 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 C9J4A7 227 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 NPIPA5E9PKD4 350 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 LOC110117498-PIK3R3F6TDL0 507 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 G3V3Q6 166 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SMLR1H3BR10 107 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 K7EQG2 157 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 AIPO00170 330 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF593O00488 134 aaPredicted RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 TNFSF11O14788 317 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SIGLEC5O15389 551 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 PLA2G10O15496 165 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 EEF1E1O43324 174 aaKnown RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF208O43345 1280 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 GMDSO60547 372 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SLC16A7O60669 478 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 CTAG2O75638 210 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 GLSO94925 669 aaPredicted RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 RPP14O95059 124 aaKnown RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 LDOC1O95751 146 aaPredicted RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 NUDT14O95848 222 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 MT-ATP6P00846 226 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 IGLV3-1P01715 115 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 TTRP02766 147 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 HLA-DPB1P04440 258 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 YES1P07947 543 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 GIG44P09565 113 aaPredicted RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ACSM4P0C7M7 580 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SLC2A1P11166 492 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 PTHLHP12272 177 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 HPGDP15428 266 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 IGFBP3P17936 291 aaPredicted RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 RAB3BP20337 219 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 NPR2P20594 1047 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 C4BPBP20851 252 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 GALP22466 123 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 AHCYP23526 432 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 CFL1P23528 166 aaKnown RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 MYL9P24844 172 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 CXCR1P25024 350 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 PSMA1P25786 263 aaKnown RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 DPP4P27487 766 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SRD5A2P31213 254 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SOX6P35712 828 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 RFC3P40938 356 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 RANBP1P43487 201 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SRP9P49458 86 aaKnown RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 EVX1P49640 407 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 TMED10P49755 219 aaKnown RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 DAP3P51398 398 aaKnown RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 RORCP51449 518 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SSR4P51571 173 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 EFNB2P52799 333 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 GBX2P52951 348 aaPredicted RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 NKX2-5P52952 324 aaPredicted RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SUCLG1P53597 346 aaKnown RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 BIDP55957 195 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 CLDN18P56856 261 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 OR2B6P58173 313 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF121P58317 390 aaPredicted RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 TAS2R43P59537 309 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 TAS2R20P59543 309 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 PRPS1P60891 318 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 PPP3R1P63098 170 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 H3F3AP84243 136 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF45Q02386 682 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 HSF2Q03933 536 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 PUDPQ08623 228 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 CDC20Q12834 499 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ZP4Q12836 540 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 UNC119Q13432 240 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ASAH1Q13510 395 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 IL18Q14116 193 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 EIF2B1Q14232 305 aaKnown RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ENDOGQ14249 297 aaKnown RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SLC17A1Q14916 467 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 TGIF1Q15583 401 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 HIST3H3Q16695 136 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 PCK2Q16822 640 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 TRIM16LQ309B1 348 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 SLC36A2Q495M3 483 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 Q499Y3 187 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 LRRC37A5PQ49AS3 106 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ACSM3Q53FZ2 586 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 HSD17B12Q53GQ0 312 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 CCDC92Q53HC0 331 aaPredicted RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 YIF1BQ5BJH7 314 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms