RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 IGLV1-36A0A0B4J1U3 117 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 A0A1W2PRD5 423 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 A0A1W2PRF3 423 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 A0A1W2PRM7 423 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 TMEM218A2RU14 115 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 ANKRD30BLA7E2S9 258 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 RNASEK-C17orf49H0YIS7 233 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 DCTN6O00399 190 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 NPFFO15130 113 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 NDUFB3O43676 98 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 CREBL2O60519 120 aaPredicted RBP5.68□□□□□ -1.5
CKS1B-205ENST00000473344 PTBP3O95758 552 aaKnown RBP5.68□□□□□ -1.5
CKS1B-205ENST00000473344 PRB2P02812 416 aaPredicted RBP5.68□□□□□ -1.5
CKS1B-205ENST00000473344 RLN2P04090 185 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 H1F0P07305 194 aaKnown RBP5.68□□□□□ -1.5
CKS1B-205ENST00000473344 NMBP08949 121 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 OSMP13725 252 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 RHCEP18577 417 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 PAICSP22234 425 aaKnown RBP5.68□□□□□ -1.5
CKS1B-205ENST00000473344 VAMP1P23763 118 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 RAB5CP51148 216 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 HMGA2P52926 109 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 RAB2AP61019 212 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 SPIBQ01892 262 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 RSPO1Q2MKA7 263 aaPredicted RBP5.68□□□□□ -1.5
CKS1B-205ENST00000473344 SNAI3Q3KNW1 292 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 IDNKQ5T6J7 187 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 CD200R1LQ6Q8B3 271 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 GSG1LQ6UXU4 331 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 Q6ZPA2 131 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 ZNF826PQ6ZT77 177 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 FAM90A1Q86YD7 464 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 ZNF561Q8N587 486 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 GCSAMQ8N6F7 178 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 FAM86B1Q8N7N1 296 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 C11orf44Q8N8P7 122 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 BEST4Q8NFU0 473 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 SLC26A10Q8NG04 563 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 OR4C15Q8NGM1 316 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 OR2AE1Q8NHA4 323 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 OR2T6Q8NHC8 308 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 GLYATL2Q8WU03 294 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 H1FXQ92522 213 aaKnown RBP5.68□□□□□ -1.5
CKS1B-205ENST00000473344 PPP1R14AQ96A00 147 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 RNFT2Q96EX2 444 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 NMNAT3Q96T66 252 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 FEVQ99581 238 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 CCL13Q99616 98 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 FAM234AQ9H0X4 552 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 TMPRSS5Q9H3S3 457 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 FGF20Q9NP95 211 aaPredicted RBP5.68□□□□□ -1.5
CKS1B-205ENST00000473344 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.68□□□□□ -1.5
CKS1B-205ENST00000473344 GSN-AS1Q9NRJ2 163 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 MRPS18AQ9NVS2 196 aaKnown RBP5.68□□□□□ -1.5
CKS1B-205ENST00000473344 VNN3Q9NY84 501 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 TAS2R3Q9NYW6 316 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 KAAG1Q9UBP8 84 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 FBLN5Q9UBX5 448 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 B9D1Q9UPM9 204 aa5.68□□□□□ -1.5
CKS1B-205ENST00000473344 A0A1W2PRQ8 180 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 METTL21EPA6NDL7 271 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 UNC119BA6NIH7 251 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 PSMD9O00233 223 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 GSTZ1O43708 216 aaPredicted RBP5.67□□□□□ -1.5
CKS1B-205ENST00000473344 ATG12O94817 140 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 MPC2O95563 127 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 TXNDC12O95881 172 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 SLC2A1P11166 492 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 MUC1P15941 1255 aaPredicted RBP5.67□□□□□ -1.5
CKS1B-205ENST00000473344 MGMTP16455 207 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 SLC6A6P31641 620 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 SAA4P35542 130 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 IFNGR2P38484 337 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 NAA10P41227 235 aaPredicted RBP5.67□□□□□ -1.5
CKS1B-205ENST00000473344 OMPP47874 163 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 TAS2R43P59537 309 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 ZNF92Q03936 586 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 PRB3Q04118 309 aaPredicted RBP5.67□□□□□ -1.5
CKS1B-205ENST00000473344 HNF4GQ14541 408 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 TAF13Q15543 124 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 SSX2Q16385 188 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 PCK2Q16822 640 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 KRTAP27-1Q3LI81 207 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 PAN3Q58A45 887 aaKnown RBP5.67□□□□□ -1.5
CKS1B-205ENST00000473344 LRRC10Q5BKY1 277 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 WDR38Q5JTN6 314 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 KPRPQ5T749 579 aaPredicted RBP5.67□□□□□ -1.5
CKS1B-205ENST00000473344 TEX36Q5VZQ5 186 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 NCR3LG1Q68D85 454 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 PGBD2Q6P3X8 592 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 DRAM2Q6UX65 266 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 C1orf122Q6ZSJ8 110 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 DPY19L4Q7Z388 723 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 C15orf54Q8N8G6 183 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 DMBX1Q8NFW5 382 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 OR4S1Q8NGB4 309 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 OR11H7Q8NGC8 314 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 OR51G2Q8NGK0 314 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 OR4C13Q8NGP0 309 aa5.67□□□□□ -1.5
CKS1B-205ENST00000473344 OR4K13Q8NH42 304 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms