RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 SMIM30A4D0T7 59 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 ZNF729A6NN14 1252 aaPredicted RBP17■□□□□ 0.31
TOP3A-204ENST00000472959 IGHV1-8P0DP01 117 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 RAB6AP20340 208 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 CHATP28329 748 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 BLVRBP30043 206 aaPredicted RBP17■□□□□ 0.31
TOP3A-204ENST00000472959 BRD3OSQ6XYD6 125 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 USP43Q70EL4 1123 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 GPR141Q7Z602 305 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 PRIMA1Q86XR5 153 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 CROCCP3Q8IVE0 287 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 C22orf15Q8WYQ4 148 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 SLC6A7Q99884 636 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 NICN1Q9BSH3 213 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 DAPK2Q9UIK4 370 aa17■□□□□ 0.31
TOP3A-204ENST00000472959 A0A0A6YYJ9 748 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 KBTBD11-OT1A0A1B0GTJ5 212 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 CLPXO76031 633 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 MT-ND4P03905 459 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 CLEC2LP0C7M8 214 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 SLC2A2P11168 524 aaPredicted RBP16.99■□□□□ 0.31
TOP3A-204ENST00000472959 GZMHP20718 246 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 DLX1P56177 255 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 LSM3P62310 102 aaKnown RBP16.99■□□□□ 0.31
TOP3A-204ENST00000472959 NKAPLQ5M9Q1 402 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 HEPN1Q6WQI6 88 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 ANKRD13BQ86YJ7 626 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 PDZD9Q8IXQ8 264 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 BCL6BQ8N143 479 aaPredicted RBP16.99■□□□□ 0.31
TOP3A-204ENST00000472959 GAPTQ8N292 157 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 OR56B1Q8NGI3 324 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 LINC00574Q9H8X3 128 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 SESN1Q9Y6P5 492 aa16.99■□□□□ 0.31
TOP3A-204ENST00000472959 MXRA5Q9NR99 2828 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 A0A0A6YYD4 124 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 IL1AP01583 271 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 CGB3P0DN86 165 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 CGB7P0DN87 165 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 GLP1RP43220 463 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 SCAND1P57086 179 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 PRB3Q04118 309 aaPredicted RBP16.98■□□□□ 0.31
TOP3A-204ENST00000472959 KLRD1Q13241 179 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 RUSC1-AS1Q66K80 236 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 OR52W1Q6IF63 320 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 HCP5Q6MZN7 132 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 RBMS3Q6XE24 437 aaKnown RBP16.98■□□□□ 0.31
TOP3A-204ENST00000472959 ZNF782Q6ZMW2 699 aaPredicted RBP16.98■□□□□ 0.31
TOP3A-204ENST00000472959 OR13A1Q8NGR1 328 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 OR13D1Q8NGV5 346 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 PLEKHJ1Q9NW61 149 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 HSF4Q9ULV5 492 aa16.98■□□□□ 0.31
TOP3A-204ENST00000472959 A0A0B4J203 849 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 UBE2QL1A1L167 161 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 METTL21EPA6NDL7 271 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 NPFFO15130 113 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 SOCS1O15524 211 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 TCF21O43680 179 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 CDK2P24941 298 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 RPL5P46777 297 aaKnown RBP16.97■□□□□ 0.31
TOP3A-204ENST00000472959 VEGFCP49767 419 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 C17orf58Q2M2W7 97 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 KRTAP21-3Q3LHN1 58 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 MIDNQ504T8 468 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 C6orf201Q7Z4U5 140 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 PIP4P2Q8N4L2 257 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 MRGPRDQ8TDS7 321 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 JMJD8Q96S16 334 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 SULT4A1Q9BR01 284 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 CALYQ9NYX4 217 aa16.97■□□□□ 0.31
TOP3A-204ENST00000472959 FOXI3A8MTJ6 420 aaPredicted RBP16.96■□□□□ 0.31
TOP3A-204ENST00000472959 GABARAPO95166 117 aa16.96■□□□□ 0.31
TOP3A-204ENST00000472959 COX7A1P24310 79 aa16.96■□□□□ 0.31
TOP3A-204ENST00000472959 RPS19P39019 145 aaKnown RBP16.96■□□□□ 0.31
TOP3A-204ENST00000472959 IDNKQ5T6J7 187 aa16.96■□□□□ 0.31
TOP3A-204ENST00000472959 SLC16A12Q6ZSM3 486 aa16.96■□□□□ 0.31
TOP3A-204ENST00000472959 PNKDQ8N490 385 aa16.96■□□□□ 0.31
TOP3A-204ENST00000472959 OR11H6Q8NGC7 330 aa16.96■□□□□ 0.31
TOP3A-204ENST00000472959 FAAP24Q9BTP7 215 aa16.96■□□□□ 0.31
TOP3A-204ENST00000472959 TMEM133Q9H2Q1 129 aa16.96■□□□□ 0.31
TOP3A-204ENST00000472959 PRDM13Q9H4Q3 707 aa16.96■□□□□ 0.31
TOP3A-204ENST00000472959 SCOCQ9UIL1 159 aa16.96■□□□□ 0.31
TOP3A-204ENST00000472959 TRAPPC2LQ9UL33 140 aa16.96■□□□□ 0.31
TOP3A-204ENST00000472959 NPIPB11E5RHQ5 1161 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 ORC5O43913 435 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 TGFBR1P36897 503 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 EFNB2P52799 333 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 VBP1P61758 197 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 NCS1P62166 190 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 PLA2G7Q13093 441 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 C6orf183Q5T699 404 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 PRAMEF5Q5TYX0 476 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 GPR107Q5VW38 600 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 TRAT1Q6PIZ9 186 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 Q6ZTK2 550 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 SIGLECL1Q8N7X8 197 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 OR10A7Q8NGE5 316 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 CCDC107Q8WV48 283 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 DYRK2Q92630 601 aa16.95■□□□□ 0.3
TOP3A-204ENST00000472959 RIMS4Q9H426 269 aaPredicted RBP16.95■□□□□ 0.3
TOP3A-204ENST00000472959 RAB9BQ9NP90 201 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms