RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 BAIAP2L2Q6UXY1 529 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 TMEM91Q6ZNR0 172 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 Q6ZSV7 163 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 RTN4RL2Q86UN3 420 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 ABHD12Q8N2K0 398 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 OR13A1Q8NGR1 328 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 MGLLQ99685 303 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 SLITRK2Q9H156 845 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 GHRLQ9UBU3 117 aa11.44□□□□□ -0.58
TOP3B-215ENST00000470338 CLPSL1A2RUU4 121 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 TSPAN9O75954 239 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 IGLV1-47P01700 117 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 PSMA1P25786 263 aaKnown RBP11.43□□□□□ -0.58
TOP3B-215ENST00000470338 TBCEQ15813 527 aaPredicted RBP11.43□□□□□ -0.58
TOP3B-215ENST00000470338 SSX2Q16385 188 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 HSD17B12Q53GQ0 312 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 C1orf100Q5SVJ3 147 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 OLFML2AQ68BL7 652 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 DHRS7BQ6IAN0 325 aaPredicted RBP11.43□□□□□ -0.58
TOP3B-215ENST00000470338 TMEM104Q8NE00 496 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 OR4P4Q8NGL7 312 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 LINC01006Q8NI28 216 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 TMEM203Q969S6 136 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 C16orf95Q9H693 158 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 SPACA1Q9HBV2 294 aa11.43□□□□□ -0.58
TOP3B-215ENST00000470338 RCC2Q9P258 522 aaKnown RBP11.43□□□□□ -0.58
TOP3B-215ENST00000470338 PKD1L1Q8TDX9 2849 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A10PA6NDY2 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A18PA6NE21 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A16PA6NEW6 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A20PA6NIJ5 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A7PA6NKC0 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A22PA8MWA6 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A12PA8MX19 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A5PA8MXJ8 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A23PA8MXZ1 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 NPIPB11E5RHQ5 1161 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 MRPS14O60783 128 aaKnown RBP11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A15PP0C7V4 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A13PP0C7W8 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A14PP0C7W9 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 FAM90A24PP0C7X0 464 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 MGMTP16455 207 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 HTR1DP28221 377 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 GLP1RP43220 463 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 DYNLT3P51808 116 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 GABARAPL2P60520 117 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 RPS25P62851 125 aaKnown RBP11.42□□□□□ -0.58
TOP3B-215ENST00000470338 LY6EQ16553 131 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 ATAD3CQ5T2N8 411 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 GLT8D1Q68CQ7 371 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 BRICD5Q6PL45 260 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 LIAT1Q6ZQX7 453 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 ZNF596Q8TC21 504 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 KIRREL1Q96J84 757 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 Q96M66 194 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 SELENOIQ9C0D9 397 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 BANF2Q9H503 90 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 ZNF286AQ9HBT8 521 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 ACOT13Q9NPJ3 140 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 CALYQ9NYX4 217 aa11.42□□□□□ -0.58
TOP3B-215ENST00000470338 CRTAPO75718 401 aaPredicted RBP11.41□□□□□ -0.58
TOP3B-215ENST00000470338 IL1AP01583 271 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 UBBP0CG47 229 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 GZMHP20718 246 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 RAB13P51153 203 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 EMX1Q04741 257 aaPredicted RBP11.41□□□□□ -0.58
TOP3B-215ENST00000470338 FAM189A2Q15884 450 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 UTF1Q5T230 341 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 ZNF497Q6ZNH5 498 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 ZNF367Q7RTV3 350 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 OR10A7Q8NGE5 316 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 SGMS2Q8NHU3 365 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 NDNFQ8TB73 568 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 MRGPRDQ8TDS7 321 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 WFDC12Q8WWY7 111 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 YTHDF1Q9BYJ9 559 aaKnown RBP11.41□□□□□ -0.58
TOP3B-215ENST00000470338 Q9H521 79 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 RAB18Q9NP72 206 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 IDI2-AS1Q9NZ38 188 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 DPM3Q9P2X0 92 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 RNF114Q9Y508 228 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 HILPDAQ9Y5L2 63 aa11.41□□□□□ -0.58
TOP3B-215ENST00000470338 NBEAL1Q6ZS30 2694 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 TRRAPQ9Y4A5 3859 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 TRAV39A0A0B4J263 110 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 TMEM30CPA0ZSE6 113 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 FAM172BPA6NC97 362 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 A6NDX4 124 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 MCRIP1C9JLW8 97 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 SLC22A1O15245 554 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 ARL6IP5O75915 188 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 MT-ND4P03905 459 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 GLAP06280 429 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 FUT3P21217 361 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 GABRA5P31644 462 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 PRRX1P54821 245 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 PROK1P58294 105 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 FABP5Q01469 135 aa11.4□□□□□ -0.58
TOP3B-215ENST00000470338 RBM39Q14498 530 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms