RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 TMEM30CPA0ZSE6 113 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 RNASEK-C17orf49H0YIS7 233 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 CA11O75493 328 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 GABARAPO95166 117 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 IFNA2P01563 188 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 IL1AP01583 271 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 IGHV1-69P01742 117 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 RAB6AP20340 208 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 CHATP28329 748 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 BLVRBP30043 206 aaPredicted RBP9.78□□□□□ -0.84
VPS13D-204ENST00000469054 RPS19P39019 145 aaKnown RBP9.78□□□□□ -0.84
VPS13D-204ENST00000469054 VEGFCP49767 419 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 RIPPLY3P57055 190 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 VBP1P61758 197 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 NCS1P62166 190 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 PLA2G7Q13093 441 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 FAM189A2Q15884 450 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 GPR107Q5VW38 600 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 SLC16A12Q6ZSM3 486 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 C9orf139Q6ZV77 190 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 PDZD9Q8IXQ8 264 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 OR13A1Q8NGR1 328 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 C22orf15Q8WYQ4 148 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 PTX4Q96A99 478 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 NAA50Q9GZZ1 169 aaKnown RBP9.78□□□□□ -0.84
VPS13D-204ENST00000469054 HEXA-AS1Q9H8Q6 139 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 SCOCQ9UIL1 159 aa9.78□□□□□ -0.84
VPS13D-204ENST00000469054 KBTBD11-OT1A0A1B0GTJ5 212 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 UBE2QL1A1L167 161 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 ZNF729A6NN14 1252 aaPredicted RBP9.77□□□□□ -0.85
VPS13D-204ENST00000469054 FOXI3A8MTJ6 420 aaPredicted RBP9.77□□□□□ -0.85
VPS13D-204ENST00000469054 SOCS1O15524 211 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 TMEM127O75204 238 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 CLPXO76031 633 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 MT-ND4P03905 459 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 CGB3P0DN86 165 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 CGB7P0DN87 165 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 IGHV1-8P0DP01 117 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 SNRPBP14678 240 aaKnown RBP9.77□□□□□ -0.85
VPS13D-204ENST00000469054 GLP1RP43220 463 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 SERPINB10P48595 397 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 UBE2E1P51965 193 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 EFNB2P52799 333 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 TMEM50BP56557 158 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 KLRD1Q13241 179 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 CTF1Q16619 201 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 C17orf58Q2M2W7 97 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 IDNKQ5T6J7 187 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 RUSC1-AS1Q66K80 236 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 HCP5Q6MZN7 132 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 BRD3OSQ6XYD6 125 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 ZNF782Q6ZMW2 699 aaPredicted RBP9.77□□□□□ -0.85
VPS13D-204ENST00000469054 ZNF497Q6ZNH5 498 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 C6orf201Q7Z4U5 140 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 CROCCP3Q8IVE0 287 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 BCL6BQ8N143 479 aaPredicted RBP9.77□□□□□ -0.85
VPS13D-204ENST00000469054 GAPTQ8N292 157 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 OR56B1Q8NGI3 324 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 MRGPRDQ8TDS7 321 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 SULT4A1Q9BR01 284 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 FAAP24Q9BTP7 215 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 GAL3ST2Q9H3Q3 398 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 PLEKHJ1Q9NW61 149 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 HSF4Q9ULV5 492 aa9.77□□□□□ -0.85
VPS13D-204ENST00000469054 NSD1Q96L73 2696 aaPredicted RBP9.77□□□□□ -0.85
VPS13D-204ENST00000469054 TRAV39A0A0B4J263 110 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 METTL21EPA6NDL7 271 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 MMP23AO75900 390 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 PAHP00439 452 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 GZMHP20718 246 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 CDK2P24941 298 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 SCAND1P57086 179 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 TUSC1Q2TAM9 212 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 HEPN1Q6WQI6 88 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 Q6ZTK2 550 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 OR13D1Q8NGV5 346 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 CCDC107Q8WV48 283 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 DYRK2Q92630 601 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 CYYR1Q96J86 154 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 SLC6A7Q99884 636 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 SOX21Q9Y651 276 aaPredicted RBP9.76□□□□□ -0.85
VPS13D-204ENST00000469054 SESN1Q9Y6P5 492 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 NAV3Q8IVL0 2385 aa9.76□□□□□ -0.85
VPS13D-204ENST00000469054 A0A1W2PRD5 423 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 A0A1W2PRF3 423 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 A0A1W2PRM7 423 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 NPIPB11E5RHQ5 1161 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 RAB27BO00194 218 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 NPFFO15130 113 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 OMGP23515 440 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 COX7A1P24310 79 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 MOGAT2Q3SYC2 334 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 PLAC9Q5JTB6 97 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 PRAMEF5Q5TYX0 476 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 OR52W1Q6IF63 320 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 USP43Q70EL4 1123 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
VPS13D-204ENST00000469054 CLVS1Q8IUQ0 354 aaPredicted RBP9.75□□□□□ -0.85
VPS13D-204ENST00000469054 PNKDQ8N490 385 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms