RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 RAB11BQ15907 218 aa16.31■□□□□ 0.2
NPHP4-206ENST00000468253 GAPTQ8N292 157 aa16.31■□□□□ 0.2
NPHP4-206ENST00000468253 PNKDQ8N490 385 aa16.31■□□□□ 0.2
NPHP4-206ENST00000468253 SPATA3Q8NHX4 192 aa16.31■□□□□ 0.2
NPHP4-206ENST00000468253 PLPPR1Q8TBJ4 325 aa16.31■□□□□ 0.2
NPHP4-206ENST00000468253 TMEM133Q9H2Q1 129 aa16.31■□□□□ 0.2
NPHP4-206ENST00000468253 VCX3AQ9NNX9 186 aa16.31■□□□□ 0.2
NPHP4-206ENST00000468253 TXNL4BQ9NX01 149 aaKnown RBP16.31■□□□□ 0.2
NPHP4-206ENST00000468253 PEX16Q9Y5Y5 336 aa16.31■□□□□ 0.2
NPHP4-206ENST00000468253 TMEM30CPA0ZSE6 113 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 DNAJC9-AS1A6NH13 148 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 CLPXO76031 633 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 MPIG6BO95866 241 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 MT-ND4P03905 459 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 RNASE1P07998 156 aaKnown RBP16.3■□□□□ 0.2
NPHP4-206ENST00000468253 MELTFP08582 738 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 LGALS4P56470 323 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 NEDD8Q15843 81 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 AANATQ16613 207 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 C17orf58Q2M2W7 97 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 SIGIRRQ6IA17 410 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 C22orf42Q6IC83 251 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 RAB12Q6IQ22 244 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 ZNF782Q6ZMW2 699 aaPredicted RBP16.3■□□□□ 0.2
NPHP4-206ENST00000468253 ZNF497Q6ZNH5 498 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 GDPGP1Q6ZNW5 385 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 RTN4RL2Q86UN3 420 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 TPRA1Q86W33 373 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 FAM89BQ8N5H3 189 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 BEND2Q8NDZ0 799 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 OR10A7Q8NGE5 316 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 AJUBAQ96IF1 538 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 C19orf24Q9BVV8 132 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 TMEM59Q9BXS4 323 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 STEAP1Q9UHE8 339 aa16.3■□□□□ 0.2
NPHP4-206ENST00000468253 MEX3AA1L020 520 aaKnown RBP16.29■□□□□ 0.2
NPHP4-206ENST00000468253 ODF3BA8MYP8 253 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 NPIPB11E5RHQ5 1161 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 HOXA3O43365 443 aaPredicted RBP16.29■□□□□ 0.2
NPHP4-206ENST00000468253 PDCD6O75340 191 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 JUNBP17275 347 aaPredicted RBP16.29■□□□□ 0.2
NPHP4-206ENST00000468253 RAB3BP20337 219 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 CDK2P24941 298 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 CD34P28906 385 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 IER3P46695 156 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 C2orf76Q3KRA6 126 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 ZNF626Q68DY1 528 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 C16orf87Q6PH81 154 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 SLC16A12Q6ZSM3 486 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 FAM46BQ96A09 425 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 FAM3DQ96BQ1 224 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 URM1Q9BTM9 101 aaKnown RBP16.29■□□□□ 0.2
NPHP4-206ENST00000468253 DPAGT1Q9H3H5 408 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 ING3Q9NXR8 418 aa16.29■□□□□ 0.2
NPHP4-206ENST00000468253 TBL2Q9Y4P3 447 aaKnown RBP16.29■□□□□ 0.2
NPHP4-206ENST00000468253 STAB1Q9NY15 2570 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 A0A087X0M5 115 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 MDFIC2A0A1B0GVS7 189 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 A0A1B0GX30 115 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 A0A1W2PRD5 423 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 A0A1W2PRF3 423 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 A0A1W2PRM7 423 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 SHISA3A0PJX4 238 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 IFITM5A6NNB3 132 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 MMP23AO75900 390 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 PAHP00439 452 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 CD36P16671 472 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 COX7A1P24310 79 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 UNC119Q13432 240 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 MINOS1Q5TGZ0 78 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 OR10K2Q6IF99 312 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 BRICD5Q6PL45 260 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 OR13A1Q8NGR1 328 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 MALSU1Q96EH3 234 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 NEDD4LQ96PU5 975 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 MINOS1-NBL1R4GNA1 71 aa16.28■□□□□ 0.2
NPHP4-206ENST00000468253 LDLRAD4O15165 306 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 ORC5O43913 435 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 P2RY14Q15391 338 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 FAM189A2Q15884 450 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 ABHD12Q8N2K0 398 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 OR51D1Q8NGF3 324 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 NEK7Q8TDX7 302 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 KCTD7Q96MP8 289 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 CLEC7AQ9BXN2 247 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 OR51E2Q9H255 320 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 ETAA1Q9NY74 926 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 CALYQ9NYX4 217 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 ZNRD1Q9P1U0 126 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 RAB22AQ9UL26 194 aa16.27■□□□□ 0.2
NPHP4-206ENST00000468253 IGHV2-26A0A0B4J1V2 119 aa16.26■□□□□ 0.19
NPHP4-206ENST00000468253 AIPO00170 330 aa16.26■□□□□ 0.19
NPHP4-206ENST00000468253 IL1AP01583 271 aa16.26■□□□□ 0.19
NPHP4-206ENST00000468253 ARG1P05089 322 aa16.26■□□□□ 0.19
NPHP4-206ENST00000468253 CHATP28329 748 aa16.26■□□□□ 0.19
NPHP4-206ENST00000468253 RPL15P61313 204 aaKnown RBP16.26■□□□□ 0.19
NPHP4-206ENST00000468253 TIMM50Q3ZCQ8 353 aa16.26■□□□□ 0.19
NPHP4-206ENST00000468253 KIAA2026Q5HYC2 2103 aa16.26■□□□□ 0.19
NPHP4-206ENST00000468253 OR5R1Q8NH85 324 aa16.26■□□□□ 0.19
NPHP4-206ENST00000468253 LPAR5Q9H1C0 372 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms