RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 MRGPRDQ8TDS7 321 aa13.65□□□□□ -0.22
TRIM56-203ENST00000467847 TSEN15Q8WW01 171 aaKnown RBP13.65□□□□□ -0.22
TRIM56-203ENST00000467847 CPNE2Q96FN4 548 aaPredicted RBP13.65□□□□□ -0.22
TRIM56-203ENST00000467847 MCRIP2Q9BUT9 160 aaKnown RBP13.65□□□□□ -0.22
TRIM56-203ENST00000467847 LINC00574Q9H8X3 128 aa13.65□□□□□ -0.22
TRIM56-203ENST00000467847 ISG20L2Q9H9L3 353 aaKnown RBP13.65□□□□□ -0.22
TRIM56-203ENST00000467847 DHDHQ9UQ10 334 aa13.65□□□□□ -0.22
TRIM56-203ENST00000467847 TMEM212A6NML5 194 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 FGF16O43320 207 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 CIB2O75838 187 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 IGKV1D-33P01593 117 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 IGKV1-33P01594 117 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 SLC6A1P30531 599 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 SSTR5P35346 364 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 SLC35B1P78383 322 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 PIGYQ3MUY2 71 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 ZIK1Q3SY52 487 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-203ENST00000467847 RSBN1Q5VWQ0 802 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-203ENST00000467847 SATL1Q86VE3 508 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 OR8H3Q8N146 312 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 SYS1Q8N2H4 156 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 PXT1Q8NFP0 134 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 TNFAIP8L1Q8WVP5 186 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 GPER1Q99527 375 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 B9D2Q9BPU9 175 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 FAM192AQ9GZU8 254 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 ZFP57Q9NU63 452 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 AASSQ9UDR5 926 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 LINC00527Q9UJ94 153 aa13.64□□□□□ -0.23
TRIM56-203ENST00000467847 NPIPB11E5RHQ5 1161 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 EI24O14681 340 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 MAGEB3O15480 346 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 ATP5HO75947 161 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 RAB3AP20336 220 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 MYCNOSP40205 109 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 IL13RA2Q14627 380 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 RSU1Q15404 277 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 UNQ9370/PRO34162Q6UXP9 181 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 SLC16A12Q6ZSM3 486 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 SLC35E3Q7Z769 313 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 FOXRED2Q8IWF2 684 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 PLPPR1Q8TBJ4 325 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 PDCD1LG2Q9BQ51 273 aa13.63□□□□□ -0.23
TRIM56-203ENST00000467847 TRAV39A0A0B4J263 110 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 A0A1W2PPE3 182 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 E9PI62 339 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 GABRPO00591 440 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 HSD17B6O14756 317 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 IGHG2P01859 326 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 KCNJ3P48549 501 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 PAX5Q02548 391 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 MRPL28Q13084 256 aaKnown RBP13.62□□□□□ -0.23
TRIM56-203ENST00000467847 DCTN2Q13561 401 aaKnown RBP13.62□□□□□ -0.23
TRIM56-203ENST00000467847 COMMD1Q8N668 190 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 OR10A7Q8NGE5 316 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 OR10K1Q8NGX5 313 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 PYDC1Q8WXC3 89 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 P2RX4Q99571 388 aa13.62□□□□□ -0.23
TRIM56-203ENST00000467847 CCRL2O00421 344 aa13.61□□□□□ -0.23
TRIM56-203ENST00000467847 FADS2O95864 444 aaKnown RBP13.61□□□□□ -0.23
TRIM56-203ENST00000467847 ALDH3A2P51648 485 aa13.61□□□□□ -0.23
TRIM56-203ENST00000467847 GBX2P52951 348 aaPredicted RBP13.61□□□□□ -0.23
TRIM56-203ENST00000467847 MOB3BQ86TA1 216 aa13.61□□□□□ -0.23
TRIM56-203ENST00000467847 ZNF695Q8IW36 515 aa13.61□□□□□ -0.23
TRIM56-203ENST00000467847 STPG2Q8N412 459 aa13.61□□□□□ -0.23
TRIM56-203ENST00000467847 SUMF2Q8NBJ7 301 aa13.61□□□□□ -0.23
TRIM56-203ENST00000467847 OR51A2Q8NGJ7 313 aa13.61□□□□□ -0.23
TRIM56-203ENST00000467847 DPCDQ9BVM2 203 aaPredicted RBP13.61□□□□□ -0.23
TRIM56-203ENST00000467847 FAM118AQ9NWS6 357 aa13.61□□□□□ -0.23
TRIM56-203ENST00000467847 ERVK13-1Q9NX77 482 aa13.61□□□□□ -0.23
TRIM56-203ENST00000467847 ZMAT5Q9UDW3 170 aaKnown RBP13.61□□□□□ -0.23
TRIM56-203ENST00000467847 GMPPBQ9Y5P6 360 aa13.61□□□□□ -0.23
TRIM56-203ENST00000467847 NCBP2LA6PVI3 153 aaKnown RBP13.6□□□□□ -0.23
TRIM56-203ENST00000467847 HTR3BO95264 441 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 GAPDHP04406 335 aaKnown RBP13.6□□□□□ -0.23
TRIM56-203ENST00000467847 REG1BP48304 166 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 SOX2P48431 317 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 RAB25P57735 213 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 DGCR2P98153 550 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 ZNF816Q0VGE8 651 aaPredicted RBP13.6□□□□□ -0.23
TRIM56-203ENST00000467847 ZNF529Q6P280 563 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 Q8NFD4 153 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 DUX3Q96PT4 197 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 AMBNQ9NP70 447 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 TAS2R4Q9NYW5 299 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 ZNF581Q9P0T4 197 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 ST3GAL6Q9Y274 331 aa13.6□□□□□ -0.23
TRIM56-203ENST00000467847 IGHV3-72A0A0B4J1Y9 119 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 IGHV1-3A0A0C4DH29 117 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 LINC01548A6NM66 108 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 AP4M1O00189 453 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 OR7C1O76099 320 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-203ENST00000467847 CDRT1O95170 752 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 GABRB1P18505 474 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 RAB40BQ12829 278 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 TEX38Q6PEX7 206 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 ASCL4Q6XD76 172 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 TGIF2LXQ8IUE1 241 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 IZUMO1Q8IYV9 350 aa13.59□□□□□ -0.23
TRIM56-203ENST00000467847 CBR4Q8N4T8 237 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms