RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 KCTD18Q6PI47 426 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-207ENST00000467273 CATSPERDQ86XM0 798 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 GID4Q8IVV7 300 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 LAX1Q8IWV1 398 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 TEX45Q8NA69 505 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 OR4D6Q8NGJ1 314 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 OR5D18Q8NGL1 313 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 PRSS3P2Q8NHM4 247 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 MARCH1Q8TCQ1 289 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 RPS4Y2Q8TD47 263 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 ACOT11Q8WXI4 607 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-207ENST00000467273 RPL36ALQ969Q0 106 aaKnown RBP4.31□□□□□ -1.72
PTCD3-207ENST00000467273 ISOC1Q96CN7 298 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 ZNF570Q96NI8 536 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 HIPK2Q9H2X6 1198 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 TXNIPQ9H3M7 391 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 POLE4Q9NR33 117 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 CYB5R1Q9UHQ9 305 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 TCF19Q9Y242 345 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 SH3GLB1Q9Y371 365 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 LRP12Q9Y561 859 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 HERC2O95714 4834 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 IGKV1D-43A0A0B4J1Z2 117 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 TMEM272A0A1B0GTI8 110 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 A0A1B0GW15 77 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 FAM90A10PA6NDY2 464 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 FABP12A6NFH5 140 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 A6NIZ1 184 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 NKX6-3A6NJ46 265 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 BIRC5O15392 142 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 TPST2O60704 377 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 SERPINB7O75635 380 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 OR2F2O95006 317 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 NDUFB8O95169 186 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 BRI3O95415 125 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 ANP32DO95626 131 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 GYPAP02724 150 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 GNAO1P09471 354 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 PSKH1P11801 424 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 PRDX2P32119 198 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 OTX1P32242 354 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-207ENST00000467273 THBS3P49746 956 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 CAV3P56539 151 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 RAP1BP61224 184 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 LSM6P62312 80 aaKnown RBP4.3□□□□□ -1.72
PTCD3-207ENST00000467273 RAP1AP62834 184 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 FMODQ06828 376 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 RPL18Q07020 188 aaKnown RBP4.3□□□□□ -1.72
PTCD3-207ENST00000467273 KLRD1Q13241 179 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 RGNQ15493 299 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 MPPED2Q15777 294 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 VAMP3Q15836 100 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 C6orf141Q5SZD1 244 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 REEP3Q6NUK4 255 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 C16orf82Q7Z2V1 217 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 PATL1Q86TB9 770 aaKnown RBP4.3□□□□□ -1.72
PTCD3-207ENST00000467273 GCSAMQ8N6F7 178 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 TMEM104Q8NE00 496 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 OR4C15Q8NGM1 316 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 OR6Q1Q8NGQ2 317 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 OR1F12Q8NHA8 337 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 PYDC1Q8WXC3 89 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 RORBQ92753 470 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 MYDGFQ969H8 173 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 ITCHQ96J02 903 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 MS4A10Q96PG2 267 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 C20orf24Q9BUV8 137 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 ST6GALNAC5Q9BVH7 336 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 WDR55Q9H6Y2 383 aaPredicted RBP4.3□□□□□ -1.72
PTCD3-207ENST00000467273 HEXA-AS1Q9H8Q6 139 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 VIPAS39Q9H9C1 493 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 BATF3Q9NR55 127 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 UFSP2Q9NUQ7 469 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 PTTG3PQ9NZH4 202 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 ABCD2Q9UBJ2 740 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 FLVCR2Q9UPI3 526 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 B9D1Q9UPM9 204 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 SMAD5-AS1Q9Y6J3 95 aa4.3□□□□□ -1.72
PTCD3-207ENST00000467273 IGHV3-64DA0A0J9YX35 117 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 A0A1W2PRD5 423 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 A0A1W2PRF3 423 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 A0A1W2PRM7 423 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 TRAPPC13A5PLN9 417 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 A6NDX4 124 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 SDHDO14521 159 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 HLA-DPB1P04440 258 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 PPIBP23284 216 aaKnown RBP4.29□□□□□ -1.72
PTCD3-207ENST00000467273 MYCNOSP40205 109 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 RBM34P42696 430 aaKnown RBP4.29□□□□□ -1.72
PTCD3-207ENST00000467273 ALDH3B2P48448 385 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 CXCR4P61073 352 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 RPL27P61353 136 aaKnown RBP4.29□□□□□ -1.72
PTCD3-207ENST00000467273 PAX5Q02548 391 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 CKAP4Q07065 602 aaKnown RBP4.29□□□□□ -1.72
PTCD3-207ENST00000467273 ECH1Q13011 328 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 OR8G1Q15617 311 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 C5orf64Q2M2E5 130 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 CCDC58Q4VC31 144 aa4.29□□□□□ -1.72
PTCD3-207ENST00000467273 C9orf66Q5T8R8 295 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms