RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 GALNT14Q96FL9 552 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 KIRREL1Q96J84 757 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 TP53RKQ96S44 253 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 DMRTA2Q96SC8 542 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 RHOFQ9HBH0 211 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 CADP27708 2225 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 TRBV6-6A0A0A6YYG2 114 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 KIR2DS1A0A191URI9 304 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 MSGN1A6NI15 193 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 POM121CA8CG34 1229 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 C1QTNF9BB2RNN3 333 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 ATP6V1G2-DDX39BF2Z307 99 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 RLN2P04090 185 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 KIR2DS4P43632 304 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 KIR2DS1Q14954 304 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 GGNBP1Q5YKI7 109 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 ZNF497Q6ZNH5 498 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 LYZL2Q7Z4W2 148 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 PRR18Q8N4B5 295 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 OR2Z1Q8NG97 314 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 DCUN1D4Q92564 292 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 MSI2Q96DH6 328 aaKnown RBP10.81□□□□□ -0.68
VAPB-203ENST00000463370 MUCL1Q96DR8 90 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 C2orf50Q96LR7 162 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 SYT3Q9BQG1 590 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 TLNRD1Q9H1K6 362 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 OR1A1Q9P1Q5 309 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.81□□□□□ -0.68
VAPB-203ENST00000463370 ZSCAN5BA6NJL1 495 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 LEUTXA8MZ59 168 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 PTBP3O95758 552 aaKnown RBP10.81□□□□□ -0.68
VAPB-203ENST00000463370 HAND1O96004 215 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 NKX6-1P78426 367 aaPredicted RBP10.81□□□□□ -0.68
VAPB-203ENST00000463370 HLA-DRB3P79483 266 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 ZNF345Q14585 488 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 IAH1Q2TAA2 248 aaPredicted RBP10.81□□□□□ -0.68
VAPB-203ENST00000463370 ACOT7LQ6ZUV0 252 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 GAPTQ8N292 157 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 IL1F10Q8WWZ1 152 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 GSX2Q9BZM3 304 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 RIMS4Q9H426 269 aaPredicted RBP10.81□□□□□ -0.68
VAPB-203ENST00000463370 METRNQ9UJH8 293 aa10.81□□□□□ -0.68
VAPB-203ENST00000463370 TRBV6-7A0A0A0MS04 114 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 A0A1B0GWJ7 208 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 HSD17B6O14756 317 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 PHF1O43189 567 aaPredicted RBP10.8□□□□□ -0.68
VAPB-203ENST00000463370 SNAPC5O75971 98 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 OR2F2O95006 317 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 CRYAAP02489 173 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 GLAP06280 429 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 TUBG1P23258 451 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 CYCSP99999 105 aaKnown RBP10.8□□□□□ -0.68
VAPB-203ENST00000463370 OR2F1Q13607 317 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 CLLU1Q5K131 121 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 FOXRED2Q8IWF2 684 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 RELL2Q8NC24 303 aaPredicted RBP10.8□□□□□ -0.68
VAPB-203ENST00000463370 TUBG2Q9NRH3 451 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 CCL28Q9NRJ3 127 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 A0A0D9SG52 128 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 hCG_1807616A0A1W2PRN6 198 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 SH2D1BO14796 132 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 MPPED1O15442 326 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 B3GALNT1O75752 331 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 DIRAS3O95661 229 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 HOXD4P09016 255 aaPredicted RBP10.8□□□□□ -0.68
VAPB-203ENST00000463370 ZNF250P15622 560 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 LUMP51884 338 aaPredicted RBP10.8□□□□□ -0.68
VAPB-203ENST00000463370 S100A10P60903 97 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 SPIN3Q5JUX0 258 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 ACP7Q6ZNF0 438 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 TMEM171Q8WVE6 324 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 USB1Q9BQ65 265 aaKnown RBP10.8□□□□□ -0.68
VAPB-203ENST00000463370 PARP12Q9H0J9 701 aaKnown RBP10.8□□□□□ -0.68
VAPB-203ENST00000463370 ZNF835Q9Y2P0 537 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 KCNIP3Q9Y2W7 256 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 ARID1AO14497 2285 aa10.8□□□□□ -0.68
VAPB-203ENST00000463370 LINC00862A6NCI5 91 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 TNFSF12O43508 249 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 BCL2L11O43521 198 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 ACAA1P09110 424 aaPredicted RBP10.79□□□□□ -0.68
VAPB-203ENST00000463370 EGR1P18146 543 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 FAM53AQ6NSI3 398 aaPredicted RBP10.79□□□□□ -0.68
VAPB-203ENST00000463370 LIAT1Q6ZQX7 453 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 TBC1D26Q86UD7 250 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 SLC51BQ86UW2 128 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 OR1S1Q8NH92 325 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 C18orf12Q96KH6 178 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 SLC5A7Q9GZV3 580 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 C3orf85A0A1B0GTC6 90 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 MEX3AA1L020 520 aaKnown RBP10.79□□□□□ -0.68
VAPB-203ENST00000463370 TMPRSS3P57727 454 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 PRSS54Q6PEW0 395 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 MEX3BQ6ZN04 569 aaKnown RBP10.79□□□□□ -0.68
VAPB-203ENST00000463370 INO80EQ8NBZ0 244 aaPredicted RBP10.79□□□□□ -0.68
VAPB-203ENST00000463370 OR4A4PQ8NGN8 299 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 ST8SIA2Q92186 375 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 CABLES2Q9BTV7 478 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 TRAPPC2LQ9UL33 140 aa10.79□□□□□ -0.68
VAPB-203ENST00000463370 IGHV3-13P01766 116 aa10.78□□□□□ -0.68
VAPB-203ENST00000463370 NMBP08949 121 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms