RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	THEM4	Q5T1C6	240 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	TMEM236	Q5W0B7	351 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	STEAP4	Q687X5	459 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	FAAP20	Q6NZ36	180 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	TGIF2LY	Q8IUE0	185 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	BBS7	Q8IWZ6	715 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	LGI3	Q8N145	548 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	KRT222	Q8N1A0	295 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	ZCCHC24	Q8N2G6	241 aa	Known RBP	2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	SPIC	Q8N5J4	248 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	ZNF525	Q8N782	197 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	LFNG	Q8NES3	379 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	NEIL3	Q8TAT5	605 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	ZFAND1	Q8TCF1	268 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	BLNK	Q8WV28	456 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	CPNE4	Q96A23	557 aa	Predicted RBP	2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	YIPF6	Q96EC8	236 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	C16orf74	Q96GX8	76 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	PGLYRP3	Q96LB9	341 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	TMEM56	Q96MV1	263 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	HBEGF	Q99075	208 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	GPR22	Q99680	433 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	SLC25A2	Q9BXI2	301 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	SLC19A3	Q9BZV2	496 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	METTL17	Q9H7H0	456 aa	Predicted RBP	2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	TMEM27	Q9HBJ8	222 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	ZNF226	Q9NYT6	803 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	TMEM9	Q9P0T7	183 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	TP53TG5	Q9Y2B4	290 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	ABCA4	P78363	2273 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	HCFC1	P51610	2035 aa		2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	CHD3	Q12873	2000 aa	Known RBP	2.27	□□□□□ -2.05
FXR1-204	ENST00000461044	TRAV8-6	A0A0B4J262	113 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	GJE1	A6NN92	205 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044		M0QZ92	97 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	TRAPPC3	O43617	180 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	RBBP9	O75884	186 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	MMP23A	O75900	390 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	GLS	O94925	669 aa	Predicted RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	DEXI	O95424	95 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	ZNF7	P17097	686 aa	Predicted RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	GRPR	P30550	384 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	CTRL	P40313	264 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	PPP1R2	P41236	205 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	ACTR1B	P42025	376 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	CDKN2C	P42773	168 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	PPOX	P50336	477 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	CRISP3	P54108	245 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	ACTB	P60709	375 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	UBE2N	P61088	152 aa	Known RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	HERVK_113	P61574	105 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	DYNLL1	P63167	89 aa	Known RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	ACTG1	P63261	375 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	CYP24A1	Q07973	514 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	SMARCB1	Q12824	385 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	SRSF6	Q13247	344 aa	Known RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	MED21	Q13503	144 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	CEACAM21	Q3KPI0	293 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	COA6	Q5JTJ3	125 aa	Known RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	SAPCD1	Q5SSQ6	148 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	SYT6	Q5T7P8	510 aa	Predicted RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	HHAT	Q5VTY9	493 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	THOC7	Q6I9Y2	204 aa	Known RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	ZNF544	Q6NX49	715 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	PPP1R2P3	Q6NXS1	205 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	CEMP1	Q6PRD7	247 aa	Predicted RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	RNF165	Q6ZSG1	346 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	TMEM251	Q8N6I4	163 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	OR4K17	Q8NGC6	315 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	OR5M1	Q8NGP8	315 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	ZMYND19	Q96E35	227 aa	Predicted RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	METTL26	Q96S19	204 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	TMEM243	Q9BU79	118 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	TAPBPL	Q9BX59	468 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	SAMD10	Q9BYL1	202 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	DHX35	Q9H5Z1	703 aa	Known RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	VNN3	Q9NY84	501 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	IL20	Q9NYY1	176 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	USE1	Q9NZ43	259 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	PAK5	Q9P286	719 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	UVRAG	Q9P2Y5	699 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	SLC7A11	Q9UPY5	501 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	POLR3H	Q9Y535	204 aa	Predicted RBP	2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	PRSS21	Q9Y6M0	314 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	HERC2	O95714	4834 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	MEGF8	Q7Z7M0	2845 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	ZGRF1	Q86YA3	2104 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	HIVEP2	P31629	2446 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	DYSF	O75923	2080 aa		2.26	□□□□□ -2.05
FXR1-204	ENST00000461044	TNRC6A	Q8NDV7	1962 aa	Known RBP	2.25	□□□□□ -2.05
FXR1-204	ENST00000461044	IGHV1-69D	A0A0B4J2H0	117 aa		2.25	□□□□□ -2.05
FXR1-204	ENST00000461044	KLF18	A0A0U1RQI7	1052 aa		2.25	□□□□□ -2.05
FXR1-204	ENST00000461044	ZFP92	A6NM28	416 aa		2.25	□□□□□ -2.05
FXR1-204	ENST00000461044	BIRC5	O15392	142 aa		2.25	□□□□□ -2.05
FXR1-204	ENST00000461044	SLC31A1	O15431	190 aa		2.25	□□□□□ -2.05
FXR1-204	ENST00000461044	TRAF3IP2	O43734	574 aa	Predicted RBP	2.25	□□□□□ -2.05
FXR1-204	ENST00000461044	CYTH3	O43739	400 aa		2.25	□□□□□ -2.05
FXR1-204	ENST00000461044	NDUFS5	O43920	106 aa		2.25	□□□□□ -2.05
FXR1-204	ENST00000461044	SPAG7	O75391	227 aa		2.25	□□□□□ -2.05

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