RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ADCYAP1P18509 176 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 SRSF5Q13243 272 aaKnown RBP6.93□□□□□ -1.3
SMG1-202ENST00000446231 OR52L2PQ8NGH6 319 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 ORAOV1Q8WV07 137 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 IL19Q9UHD0 177 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 M0R135 149 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 SPINT2O43291 252 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 UPK3AO75631 287 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 MELTFP08582 738 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 SRP19P09132 144 aaKnown RBP6.93□□□□□ -1.3
SMG1-202ENST00000446231 MRPL54Q6P161 138 aaKnown RBP6.93□□□□□ -1.3
SMG1-202ENST00000446231 ZNF799Q96GE5 643 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 TMEM191AQ9H0A3 160 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 C2orf72A6NCS6 295 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 RHOBP62745 196 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 OR1A1Q9P1Q5 309 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 MSGN1A6NI15 193 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 PLGLB1Q02325 96 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 PLXDC1Q8IUK5 500 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 RCC1LQ96I51 464 aaKnown RBP6.93□□□□□ -1.3
SMG1-202ENST00000446231 TOX2Q96NM4 488 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 KLF2Q9Y5W3 355 aaPredicted RBP6.93□□□□□ -1.3
SMG1-202ENST00000446231 ANKRD36CQ5JPF3 1778 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 CRYM-AS1A6NIL9 109 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 PAGE4O60829 102 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 SERF2P84101 59 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 TAAR6Q96RI8 345 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 SRD5A3Q9H8P0 318 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 MCTS1Q9ULC4 181 aaKnown RBP6.93□□□□□ -1.3
SMG1-202ENST00000446231 A0A1W2PR80 420 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 H0YIZ8 118 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 CEACAM5P06731 702 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 RTL10Q7L3V2 364 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 DIRC2Q96SL1 478 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 NUDT16L1Q9BRJ7 211 aaKnown RBP6.93□□□□□ -1.3
SMG1-202ENST00000446231 ICAM5Q9UMF0 924 aa6.93□□□□□ -1.3
SMG1-202ENST00000446231 BCL3P20749 454 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 CD99L2Q8TCZ2 262 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 A0A1B0GV72 72 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 NXPH2O95156 264 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 FUT5Q11128 374 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 FDX2Q6P4F2 183 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 BEND2Q8NDZ0 799 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 RTBDNQ9BSG5 229 aaPredicted RBP6.92□□□□□ -1.3
SMG1-202ENST00000446231 WDR1O75083 606 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 TNFSF10P50591 281 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 PYY3Q5JQD4 70 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 TMEM211Q6ICI0 200 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 CLDN23Q96B33 292 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 DMRTA2Q96SC8 542 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 DLEC1Q9Y238 1755 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 SNAI3Q3KNW1 292 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 MOB3AQ96BX8 217 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 GMPPAQ96IJ6 420 aaPredicted RBP6.92□□□□□ -1.3
SMG1-202ENST00000446231 CES1P1Q9UKY3 287 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 FOXK1P85037 733 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 GABRA6Q16445 453 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 GRIFINA4D1Z8 144 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 FKBP2P26885 142 aaKnown RBP6.92□□□□□ -1.3
SMG1-202ENST00000446231 CCL20P78556 96 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 MBNL1Q9NR56 388 aaKnown RBP6.92□□□□□ -1.3
SMG1-202ENST00000446231 P04436 131 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 MLF2Q15773 248 aaPredicted RBP6.92□□□□□ -1.3
SMG1-202ENST00000446231 BPIFA4PQ86YQ2 179 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 USP9YO00507 2555 aaPredicted RBP6.92□□□□□ -1.3
SMG1-202ENST00000446231 PPP1R35Q8TAP8 253 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 J3QRE1 110 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 SEMA4FO95754 770 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 ZNF260Q3ZCT1 412 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 CDCA3Q99618 268 aaPredicted RBP6.92□□□□□ -1.3
SMG1-202ENST00000446231 A0A1W2PPE3 182 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 EPPINO95925 133 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 B4GALT1P15291 398 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 UBE2NP61088 152 aaKnown RBP6.92□□□□□ -1.3
SMG1-202ENST00000446231 C10orf91Q5T1B1 145 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 OR2I1PQ8NGU4 316 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 WDR61Q9GZS3 305 aaKnown RBP6.92□□□□□ -1.3
SMG1-202ENST00000446231 MKRN2OSH3BPM6 223 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 RIPPLY3P57055 190 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 SCGB2A1O75556 95 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 CBLN1P23435 193 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 ROM1Q03395 351 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 OR8B8Q15620 311 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 Q5PR19 223 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 ST6GALNAC3Q8NDV1 305 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 FAM173AQ9BQD7 235 aa6.92□□□□□ -1.3
SMG1-202ENST00000446231 LTBP3Q9NS15 1303 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 IFITM10A6NMD0 228 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 PRAMEF26H0Y7S4 382 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 RAB29O14966 203 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 CXorf1O96002 111 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 SAMD13Q5VXD3 122 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 ZNF573Q86YE8 665 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 TMEM252Q8N6L7 170 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 GPX7Q96SL4 187 aaPredicted RBP6.91□□□□□ -1.3
SMG1-202ENST00000446231 RNF122Q9H9V4 155 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 ZNF835Q9Y2P0 537 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 RTL8BQ17RB0 113 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 NCOR1P1Q9H4R4 102 aa6.91□□□□□ -1.3
SMG1-202ENST00000446231 MGAT2Q10469 447 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms