RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TEX46H3BTG2 121 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 M0R1B8 84 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 PSMD12O00232 456 aaPredicted RBP1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 SIRPB1O00241 398 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 RBFOX2O43251 390 aaKnown RBP eCLIP1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 DEDDO75618 318 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 NSA2O95478 260 aaKnown RBP1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 C1QAP02745 245 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR56A5P0C7T3 313 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 PIRTP0C851 137 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 LYNX1P0DP58 116 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 CMPK1P30085 196 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 SDC4P31431 198 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 PCK1P35558 622 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 PMELP40967 661 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 CX3CR1P49238 355 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNF83P51522 516 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 IDH3GP51553 393 aaPredicted RBP1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 RPL26P61254 145 aaKnown RBP1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 CDH17Q12864 832 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 MOBPQ13875 183 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 FAM53BQ14153 422 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR7A5Q15622 319 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNF726P1Q15940 193 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 SMUG1Q53HV7 270 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNF684Q5T5D7 378 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 GPR107Q5VW38 600 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 C22orf42Q6IC83 251 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 TTC23LQ6PF05 361 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 FAM151BQ6UXP7 276 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 WDFY1Q8IWB7 410 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 H1FOOQ8IZA3 346 aaPredicted RBP1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 ATPAF2Q8N5M1 289 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNF709Q8N972 641 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 APCDD1LQ8NCL9 501 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 NOXO1Q8NFA2 376 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR2A1Q8NGT9 310 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 NUBPLQ8TB37 319 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 PRRC1Q96M27 445 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 LYSMD1Q96S90 227 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 TIMM17AQ99595 171 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR52A5Q9H2C5 316 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 NEK6Q9HC98 313 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 HMG20AQ9NP66 347 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 DYNLRB1Q9NP97 96 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 DMAC2Q9NW81 257 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNRD1Q9P1U0 126 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 RPL26L1Q9UNX3 145 aaKnown RBP1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 C15orf41Q9Y2V0 281 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 CSMD3Q7Z407 3707 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 MUC4Q99102 2169 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 DNAH9Q9NYC9 4486 aa1.89□□□□□ -2.11
HMGB3P12-201ENST00000438745 FREM3P0C091 2139 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 IGLV1-36A0A0B4J1U3 117 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 SIGLEC16A6NMB1 481 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 SMKR1H3BMG3 65 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 TP53I11O14683 189 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 EIF4E2O60573 245 aaKnown RBP1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 RP2O75695 350 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 RPN2P04844 631 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 IFNA16P05015 189 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 ARG1P05089 322 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 CD3GP09693 182 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 CD9P21926 228 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 DTYMKP23919 212 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 PSMB5P28074 263 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 SSTR5P35346 364 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 MAGEA1P43355 309 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 SYKP43405 635 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 P2RX1P51575 399 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 CDKN2DP55273 166 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 RGS8P57771 180 aaPredicted RBP1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 RAB10P61026 200 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 UBE2NP61088 152 aaKnown RBP1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 SKP1P63208 163 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 LCN2P80188 198 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 LIPEQ05469 1076 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNF266Q14584 549 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 DEFB112Q30KQ8 113 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 ORMDL2Q53FV1 153 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 NTM-AS1Q6ZSK4 140 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 LINC00336Q6ZUF6 198 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 CENPQQ7L2Z9 268 aaPredicted RBP1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 BHLHA15Q7RTS1 189 aaPredicted RBP1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 SSX8Q7RTT4 187 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 MRPL55Q7Z7F7 128 aaKnown RBP1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 CMC1Q7Z7K0 106 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 C1orf174Q8IYL3 243 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 ZNF561Q8N587 486 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 TMEM86BQ8N661 226 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR10AD1Q8NGE0 317 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR52E2Q8NGJ4 325 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR1J4Q8NGS1 313 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR8U1Q8NH10 309 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 OR5K2Q8NHB8 316 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 LYPD6BQ8NI32 183 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 COQ8AQ8NI60 647 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 FNDC9Q8TBE3 224 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 PIFOQ8TCI5 191 aa1.88□□□□□ -2.11
HMGB3P12-201ENST00000438745 FAM172AQ8WUF8 416 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms