RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 ARFGEF2Q9Y6D5 1785 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 SPATA31D1Q6ZQQ2 1576 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 HMX2A2RU54 273 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 OR51M1Q9H341 326 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 CTAG2O75638 210 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 PLAUP00749 431 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 COL9A3Q14050 684 aaPredicted RBP14.61□□□□□ -0.07
RIF1-204ENST00000430328 OR10AC1Q8NH08 325 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 NEUROG1Q92886 237 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 HLA-DQA1P01909 254 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 GFRALQ6UXV0 394 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 TXNRD2Q9NNW7 524 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 SLC52A3Q9NQ40 469 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 TRDCB7Z8K6 153 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 DHHO43323 396 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 KCNAB3O43448 404 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 HOXC4P09017 264 aaPredicted RBP14.61□□□□□ -0.07
RIF1-204ENST00000430328 CTXND1A0A1B0GTU2 59 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 PDCD6O75340 191 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 SUMO2P61956 95 aaKnown RBP14.61□□□□□ -0.07
RIF1-204ENST00000430328 MS4A6EQ96DS6 147 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 DERL1Q9BUN8 251 aa14.61□□□□□ -0.07
RIF1-204ENST00000430328 XRN1Q8IZH2 1706 aaKnown RBP14.61□□□□□ -0.07
RIF1-204ENST00000430328 A0A1W2PR48 441 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 MKRN2OSH3BPM6 223 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 SLC25A20O43772 301 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 DSCR4P56555 118 aaPredicted RBP14.6□□□□□ -0.07
RIF1-204ENST00000430328 PDCD1Q15116 288 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 TMEM249Q2WGJ8 235 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 HSF5Q4G112 596 aaPredicted RBP14.6□□□□□ -0.07
RIF1-204ENST00000430328 PAXXQ9BUH6 204 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 ARHGEF28Q8N1W1 1705 aaKnown RBP14.6□□□□□ -0.07
RIF1-204ENST00000430328 CDC14BO60729 498 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 OR10S1Q8NGN2 331 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 OR1P1Q8NH06 330 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 ZNF384Q8TF68 577 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 LINC01387J3KSC0 135 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 TM4SF20Q53R12 229 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 MAVSQ7Z434 540 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 FAM208AQ9UK61 1670 aaKnown RBP14.6□□□□□ -0.07
RIF1-204ENST00000430328 RNPS1Q15287 305 aaKnown RBP14.6□□□□□ -0.07
RIF1-204ENST00000430328 PAPPA-AS1Q5QFB9 102 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 ORAI1Q96D31 301 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 TRAV8-2A0A0B4J237 113 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 TNFAIP6P98066 277 aaPredicted RBP14.6□□□□□ -0.07
RIF1-204ENST00000430328 SLC37A2Q8TED4 501 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 CA10Q9NS85 328 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 FZR1Q9UM11 496 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 ERGP11308 486 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 TCF24Q7RTU0 167 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 A0A1W2PQM1 296 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 A1L4Q6 167 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 FTH1P19P0C7X4 201 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 OR2V1Q8NHB1 315 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 C16orf92Q96LL3 132 aa14.6□□□□□ -0.07
RIF1-204ENST00000430328 ALKBH7Q9BT30 221 aaPredicted RBP14.6□□□□□ -0.07
RIF1-204ENST00000430328 AURKAIP1Q9NWT8 199 aaPredicted RBP14.6□□□□□ -0.07
RIF1-204ENST00000430328 RCC2Q9P258 522 aaKnown RBP14.6□□□□□ -0.07
RIF1-204ENST00000430328 DNAJC25-GNG10A0A024R161 153 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 IGHV3-43A0A0B4J1X8 118 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 TRAV21A0A0B4J279 112 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 IGHV3-43DP0DP04 118 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 ANKRD37Q7Z713 158 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 MRGPRDQ8TDS7 321 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 MFRPQ9BY79 579 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 AICDAQ9GZX7 198 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 HS3ST3A1Q9Y663 406 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 KCNMB2Q9Y691 235 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 IGKV3D-15A0A087WSY6 115 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 IGKV3-15P01624 115 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 GFRA1P56159 465 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 PRNDQ9UKY0 176 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 GTF3C1Q12789 2109 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 GFYI3L273 518 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 TIMP1P01033 207 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 PREX1Q8TCU6 1659 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 TMPRSS2O15393 492 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 ZNF83P51522 516 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 RND1Q92730 232 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 RARRES2Q99969 163 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 GHITMQ9H3K2 345 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 PARP11Q9NR21 331 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 IGKV3D-11A0A0A0MRZ8 115 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 PTGESO14684 152 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 PLPP2O43688 288 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 EPPINO95925 133 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 IGKV3-11P04433 115 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 RAC3P60763 192 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 IBA57Q5T440 356 aaKnown RBP14.59□□□□□ -0.07
RIF1-204ENST00000430328 TCTN3Q6NUS6 607 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 FAHD1Q6P587 224 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 DDB2Q92466 427 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 PPT2Q9UMR5 302 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 WIPI2Q9Y4P8 454 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 LINC01553A4QN01 128 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 CYB5R3P00387 301 aaPredicted RBP14.59□□□□□ -0.07
RIF1-204ENST00000430328 SBK3P0C264 359 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 MGAT2Q10469 447 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 C2orf88Q9BSF0 95 aa14.59□□□□□ -0.07
RIF1-204ENST00000430328 INSIG2Q9Y5U4 225 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms