RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 SEC11BP0C7V7 166 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 VSIG8P0DPA2 414 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 HOXA5P20719 270 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 CHRNB4P30926 498 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 SUPT4H1P63272 117 aaKnown RBP11.04□□□□□ -0.64
LINC00642-201ENST00000419459 P2RY6Q15077 328 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 BHLHA15Q7RTS1 189 aaPredicted RBP11.04□□□□□ -0.64
LINC00642-201ENST00000419459 LHFPL1Q86WI0 220 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 CPEB3Q8NE35 698 aaKnown RBP11.04□□□□□ -0.64
LINC00642-201ENST00000419459 OR8U1Q8NH10 309 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 NKX3-1Q99801 234 aaPredicted RBP11.04□□□□□ -0.64
LINC00642-201ENST00000419459 ARV1Q9H2C2 271 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 PLEKHA2Q9HB19 425 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 JKAMPQ9P055 326 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 A0A1B0GW64 132 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 K7EPK0 472 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 CELA3BP08861 270 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 ECI1P42126 302 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 SULT1A1P50225 295 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 MMP16P51512 607 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 DEFA6Q01524 100 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 SLC22A6Q4U2R8 563 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 C4orf17Q53FE4 359 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 FAM71E2Q8N5Q1 922 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 LFNGQ8NES3 379 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 GJC3Q8NFK1 279 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 RNF133Q8WVZ7 376 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 SGK3Q96BR1 496 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 CMBLQ96DG6 245 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 OR10C1Q96KK4 312 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 PBDC1Q9BVG4 233 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 HCFC1P51610 2035 aa11.04□□□□□ -0.64
LINC00642-201ENST00000419459 GCN1Q92616 2671 aaKnown RBP11.03□□□□□ -0.64
LINC00642-201ENST00000419459 CENPEQ02224 2701 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 F5H5K5 113 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 M0R036 132 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 AGPAT2O15120 278 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 RNF224P0DH78 156 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 GNB3P16520 340 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 CCNOP22674 350 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 RPL12P30050 165 aaKnown RBP11.03□□□□□ -0.64
LINC00642-201ENST00000419459 HOXC12P31275 282 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 CDX1P47902 265 aaPredicted RBP11.03□□□□□ -0.64
LINC00642-201ENST00000419459 SLC9A3R2Q15599 337 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 GUK1Q16774 197 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 ANKRD55Q3KP44 614 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 NRN1LQ496H8 165 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 ZNF529Q6P280 563 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 ETV3LQ6ZN32 361 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 MDP1Q86V88 176 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 PNLDC1Q8NA58 520 aaKnown RBP11.03□□□□□ -0.64
LINC00642-201ENST00000419459 OR51F2Q8NH61 342 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 EMG1Q92979 244 aaKnown RBP11.03□□□□□ -0.64
LINC00642-201ENST00000419459 PFDN5Q99471 154 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 OR2H1Q9GZK4 316 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 WNT5BQ9H1J7 359 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 UFSP2Q9NUQ7 469 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 STRAPQ9Y3F4 350 aaKnown RBP11.03□□□□□ -0.64
LINC00642-201ENST00000419459 PLCE1Q9P212 2302 aa11.03□□□□□ -0.64
LINC00642-201ENST00000419459 ZNF878C9JN71 531 aa11.02□□□□□ -0.64
LINC00642-201ENST00000419459 IDH3GP51553 393 aaPredicted RBP11.02□□□□□ -0.64
LINC00642-201ENST00000419459 TAS2R46P59540 309 aa11.02□□□□□ -0.64
LINC00642-201ENST00000419459 UBE2NP61088 152 aaKnown RBP11.02□□□□□ -0.64
LINC00642-201ENST00000419459 AKIRIN2Q53H80 203 aa11.02□□□□□ -0.64
LINC00642-201ENST00000419459 WDR31Q8NA23 367 aa11.02□□□□□ -0.64
LINC00642-201ENST00000419459 OR5D14Q8NGL3 314 aa11.02□□□□□ -0.64
LINC00642-201ENST00000419459 OR5H2Q8NGV7 314 aa11.02□□□□□ -0.64
LINC00642-201ENST00000419459 RTBDNQ9BSG5 229 aaPredicted RBP11.02□□□□□ -0.64
LINC00642-201ENST00000419459 SCRT1Q9BWW7 348 aa11.02□□□□□ -0.64
LINC00642-201ENST00000419459 SPACA1Q9HBV2 294 aa11.02□□□□□ -0.64
LINC00642-201ENST00000419459 C1orf123Q9NWV4 160 aa11.02□□□□□ -0.64
LINC00642-201ENST00000419459 ICE1Q9Y2F5 2266 aa11.02□□□□□ -0.64
LINC00642-201ENST00000419459 TMEM269A0A1B0GVZ9 245 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 hCG_1809904A0A1W2PP81 198 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 A0A1W2PR64 198 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 A0A1W2PRV1 198 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 OR5H1A6NKK0 313 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 SYNGR3O43761 229 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 H2BFMP0C1H6 154 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 DANCRP0C864 163 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 RPS2P15880 293 aaKnown RBP11.02□□□□□ -0.65
LINC00642-201ENST00000419459 HIST1H1DP16402 221 aaKnown RBP11.02□□□□□ -0.65
LINC00642-201ENST00000419459 S100A2P29034 98 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 THBS4P35443 961 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 S100A10P60903 97 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 RSPO1Q2MKA7 263 aaPredicted RBP11.02□□□□□ -0.65
LINC00642-201ENST00000419459 Q3ZCU0 254 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 ADAM5Q6NVV9 412 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 HEPN1Q6WQI6 88 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 FAM24BQ8N5W8 94 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 BHLHE23Q8NDY6 225 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 KCNG3Q8TAE7 436 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 SLC35B3Q9H1N7 401 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC00642-201ENST00000419459 FBXL17Q9UF56 701 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 TMED3Q9Y3Q3 217 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 ABCA4P78363 2273 aa11.02□□□□□ -0.65
LINC00642-201ENST00000419459 NBPF19A0A087WUL8 3843 aa11.01□□□□□ -0.65
LINC00642-201ENST00000419459 TRBV23-1A0A0A0MS06 115 aa11.01□□□□□ -0.65
LINC00642-201ENST00000419459 C5orf63A6NC05 138 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms