RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 VENTXO95231 258 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 RBP4P02753 201 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 CLEC2LP0C7M8 214 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 IGHV1-8P0DP01 117 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 SLC2A2P11168 524 aaPredicted RBP10.19□□□□□ -0.78
SKA1-203ENST00000417656 CFPP27918 469 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 SDC2P34741 201 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 TGFBR1P36897 503 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 GDNFP39905 211 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 PSMD7P51665 324 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 PAX5Q02548 391 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 MXD1Q05195 221 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 PLA2G7Q13093 441 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 DEFB112Q30KQ8 113 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 TIMM50Q3ZCQ8 353 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 RTN4RL2Q86UN3 420 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 TM2D1Q9BX74 207 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 MRPS26Q9BYN8 205 aaKnown RBP10.19□□□□□ -0.78
SKA1-203ENST00000417656 LPAR5Q9H1C0 372 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 GAL3ST2Q9H3Q3 398 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 OR6C3Q9NZP0 311 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 PEX16Q9Y5Y5 336 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 SESN1Q9Y6P5 492 aa10.19□□□□□ -0.78
SKA1-203ENST00000417656 NOTOA8MTQ0 251 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 MCRIP1C9JLW8 97 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 LDLRAD4O15165 306 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 AIREO43918 545 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 FUT3P21217 361 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 OMGP23515 440 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 CHATP28329 748 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 SAA4P35542 130 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 UBE2E1P51965 193 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 BPIFB3P59826 476 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 HILS1P60008 231 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 PRR20EP86478 221 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 PRR20CP86479 221 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 PRR20DP86480 221 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 PRR20BP86481 221 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 PRR20AP86496 221 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 C17orf58Q2M2W7 97 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 C2orf76Q3KRA6 126 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 SLC35E4Q6ICL7 350 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 BAIAP2L2Q6UXY1 529 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 TPRA1Q86W33 373 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 OR13F1Q8NGS4 319 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 MRGPRDQ8TDS7 321 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 CORO2AQ92828 525 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 BARHL1Q9BZE3 327 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 LIN7BQ9HAP6 207 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 ESM1Q9NQ30 184 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 ETAA1Q9NY74 926 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 TAS2R3Q9NYW6 316 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 CALYQ9NYX4 217 aa10.18□□□□□ -0.78
SKA1-203ENST00000417656 UBE2QL1A1L167 161 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 MEIOCA2RUB1 952 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 FAM172BPA6NC97 362 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 DNAJC9-AS1A6NH13 148 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 ZNF729A6NN14 1252 aaPredicted RBP10.17□□□□□ -0.78
SKA1-203ENST00000417656 CDK2P24941 298 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 SSTR5P35346 364 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 EFNB2P52799 333 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 LSM3P62310 102 aaKnown RBP10.17□□□□□ -0.78
SKA1-203ENST00000417656 RBM39Q14498 530 aaKnown RBP10.17□□□□□ -0.78
SKA1-203ENST00000417656 KIAA2026Q5HYC2 2103 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 SFXN4Q6P4A7 337 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 RBMS3Q6XE24 437 aaKnown RBP10.17□□□□□ -0.78
SKA1-203ENST00000417656 ZNF497Q6ZNH5 498 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 USP43Q70EL4 1123 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 C6orf201Q7Z4U5 140 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 CCDC107Q8WV48 283 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 DUX5Q96PT3 197 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 NEDD4LQ96PU5 975 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 SULT4A1Q9BR01 284 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 URM1Q9BTM9 101 aaKnown RBP10.17□□□□□ -0.78
SKA1-203ENST00000417656 FUNDC2Q9BWH2 189 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 NCOR1P1Q9H4R4 102 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 HEXA-AS1Q9H8Q6 139 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 FBLN5Q9UBX5 448 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 DAPK2Q9UIK4 370 aa10.17□□□□□ -0.78
SKA1-203ENST00000417656 A0A0A6YYJ9 748 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 IGHV2-26A0A0B4J1V2 119 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 KBTBD11-OT1A0A1B0GTJ5 212 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 SOCS1O15524 211 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 IL1AP01583 271 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 BLVRBP30043 206 aaPredicted RBP10.16□□□□□ -0.78
SKA1-203ENST00000417656 VEGFCP49767 419 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 BAMBIQ13145 260 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 KRTAP21-3Q3LHN1 58 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 HEPN1Q6WQI6 88 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 GDPGP1Q6ZNW5 385 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 ZDHHC22Q8N966 263 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 OR13D1Q8NGV5 346 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 OR4K15Q8NH41 348 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 UBALD1Q8TB05 177 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 C17orf50Q8WW18 174 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 JMJD8Q96S16 334 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 TMEM133Q9H2Q1 129 aa10.16□□□□□ -0.78
SKA1-203ENST00000417656 FOXI3A8MTJ6 420 aaPredicted RBP10.15□□□□□ -0.78
SKA1-203ENST00000417656 ODF3BA8MYP8 253 aa10.15□□□□□ -0.78
SKA1-203ENST00000417656 H3BUI4 141 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms