RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SIGLECL1Q8N7X8 197 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 ZDHHC16Q969W1 377 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 MRPS26Q9BYN8 205 aaKnown RBP18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 ETAA1Q9NY74 926 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 RAB22AQ9UL26 194 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 SESN1Q9Y6P5 492 aa18.88■□□□□ 0.61
SMARCB1-205ENST00000417137 CLPXO76031 633 aa18.87■□□□□ 0.61
SMARCB1-205ENST00000417137 GZMHP20718 246 aa18.87■□□□□ 0.61
SMARCB1-205ENST00000417137 SDC2P34741 201 aa18.87■□□□□ 0.61
SMARCB1-205ENST00000417137 GLP1RP43220 463 aa18.87■□□□□ 0.61
SMARCB1-205ENST00000417137 HILS1P60008 231 aa18.87■□□□□ 0.61
SMARCB1-205ENST00000417137 PRB3Q04118 309 aaPredicted RBP18.87■□□□□ 0.61
SMARCB1-205ENST00000417137 TUSC1Q2TAM9 212 aa18.87■□□□□ 0.61
SMARCB1-205ENST00000417137 MIDNQ504T8 468 aa18.87■□□□□ 0.61
SMARCB1-205ENST00000417137 ZNF782Q6ZMW2 699 aaPredicted RBP18.87■□□□□ 0.61
SMARCB1-205ENST00000417137 CENPOQ9BU64 300 aa18.87■□□□□ 0.61
SMARCB1-205ENST00000417137 KCNK15Q9H427 330 aa18.87■□□□□ 0.61
SMARCB1-205ENST00000417137 SMIM18P0DKX4 95 aa18.86■□□□□ 0.61
SMARCB1-205ENST00000417137 LGALS4P56470 323 aa18.86■□□□□ 0.61
SMARCB1-205ENST00000417137 DEFB112Q30KQ8 113 aa18.86■□□□□ 0.61
SMARCB1-205ENST00000417137 NKAPLQ5M9Q1 402 aa18.86■□□□□ 0.61
SMARCB1-205ENST00000417137 SIGIRRQ6IA17 410 aa18.86■□□□□ 0.61
SMARCB1-205ENST00000417137 HCP5Q6MZN7 132 aa18.86■□□□□ 0.61
SMARCB1-205ENST00000417137 HEPN1Q6WQI6 88 aa18.86■□□□□ 0.61
SMARCB1-205ENST00000417137 ZNF497Q6ZNH5 498 aa18.86■□□□□ 0.61
SMARCB1-205ENST00000417137 PNKDQ8N490 385 aa18.86■□□□□ 0.61
SMARCB1-205ENST00000417137 PIP4P2Q8N4L2 257 aa18.86■□□□□ 0.61
SMARCB1-205ENST00000417137 LIN7BQ9HAP6 207 aa18.86■□□□□ 0.61
SMARCB1-205ENST00000417137 KBTBD11-OT1A0A1B0GTJ5 212 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 A0A1W2PRD5 423 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 A0A1W2PRF3 423 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 A0A1W2PRM7 423 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 MT-ND4P03905 459 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 COX7A1P24310 79 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 CDK2P24941 298 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 BLVRBP30043 206 aaPredicted RBP18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 BAMBIQ13145 260 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 FAM89BQ8N5H3 189 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 OR13A1Q8NGR1 328 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 LPAR5Q9H1C0 372 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 PRDM13Q9H4Q3 707 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 PLEKHJ1Q9NW61 149 aa18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 SOX21Q9Y651 276 aaPredicted RBP18.85■□□□□ 0.61
SMARCB1-205ENST00000417137 UBE2QL1A1L167 161 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 MEIOCA2RUB1 952 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 LDLRAD4O15165 306 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 PAHP00439 452 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 CGB3P0DN86 165 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 CGB7P0DN87 165 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 CHATP28329 748 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 MXD1Q05195 221 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 NR2C2APQ86WQ0 139 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 OR56B1Q8NGI3 324 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 OR13F1Q8NGS4 319 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 MRGPRDQ8TDS7 321 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 ZNF48Q96MX3 618 aaPredicted RBP18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 NICN1Q9BSH3 213 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 TMEM133Q9H2Q1 129 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 RNF167Q9H6Y7 350 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 RAB9BQ9NP90 201 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 CALYQ9NYX4 217 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 TRAPPC2LQ9UL33 140 aa18.84■□□□□ 0.61
SMARCB1-205ENST00000417137 A0A0U1RQK1 487 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 TMEM272A0A1B0GTI8 110 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 SMIM30A4D0T7 59 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 TRIM77I1YAP6 450 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 VENTXO95231 258 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 FBP1P09467 338 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 RAB6AP20340 208 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 SAA4P35542 130 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 C17orf58Q2M2W7 97 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 PRAMEF5Q5TYX0 476 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 RTN4RL2Q86UN3 420 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 OR11H6Q8NGC7 330 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 TMEM158Q8WZ71 300 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 PTX4Q96A99 478 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 FUNDC2Q9BWH2 189 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 DAPK2Q9UIK4 370 aa18.83■□□□□ 0.6
SMARCB1-205ENST00000417137 METTL21EPA6NDL7 271 aa18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 SLC2A2P11168 524 aaPredicted RBP18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 DYNC1I2Q13409 638 aaKnown RBP18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 SFXN4Q6P4A7 337 aa18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 Q6YL49 198 aa18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 OR10A7Q8NGE5 316 aa18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 CCDC107Q8WV48 283 aa18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 ZFAND2BQ8WV99 257 aa18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 FAAP24Q9BTP7 215 aa18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 CLEC7AQ9BXN2 247 aa18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 LINC00574Q9H8X3 128 aa18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 ZMAT3Q9HA38 289 aaKnown RBP18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 HSF4Q9ULV5 492 aa18.82■□□□□ 0.6
SMARCB1-205ENST00000417137 SOCS1O15524 211 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 ORC5O43913 435 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 TMEM127O75204 238 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 MMP23AO75900 390 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 IL1AP01583 271 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 ARG1P05089 322 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 OMGP23515 440 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 VEGFCP49767 419 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 LSM3P62310 102 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms