RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 AESQ08117 197 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 PEA15Q15121 130 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 HIST3H3Q16695 136 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 PDLIM3Q53GG5 364 aaPredicted RBP12.07□□□□□ -0.48
SCAF4-202ENST00000399804 MS4A7Q9GZW8 240 aaPredicted RBP12.07□□□□□ -0.48
SCAF4-202ENST00000399804 SLC25A32Q9H2D1 315 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 DFFBO76075 338 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 IGHV1-2P23083 117 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 HOXA1P49639 335 aaPredicted RBP12.06□□□□□ -0.48
SCAF4-202ENST00000399804 H2BFSP57053 126 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 CLLU1Q5K131 121 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 LIAT1Q6ZQX7 453 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 MDS2Q8NDY4 140 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 NUDT16L1Q9BRJ7 211 aaKnown RBP12.06□□□□□ -0.48
SCAF4-202ENST00000399804 PNRC2Q9NPJ4 139 aaKnown RBP12.06□□□□□ -0.48
SCAF4-202ENST00000399804 OR5H1A6NKK0 313 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 M0R1X1 148 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 CRYGSP22914 178 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 PMELP40967 661 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 GABRA6Q16445 453 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 POM121L2Q96KW2 1035 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 S1PR3Q99500 378 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 OR2D2Q9H210 308 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 TMEM210A6NLX4 147 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 CELA3BP08861 270 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 HOXD4P09016 255 aaPredicted RBP12.06□□□□□ -0.48
SCAF4-202ENST00000399804 RCC1P18754 421 aaPredicted RBP12.06□□□□□ -0.48
SCAF4-202ENST00000399804 HIPK2Q9H2X6 1198 aa12.06□□□□□ -0.48
SCAF4-202ENST00000399804 UNKLQ9H9P5 680 aaKnown RBP12.06□□□□□ -0.48
SCAF4-202ENST00000399804 M6PRP20645 277 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 KCNJ3P48549 501 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 UCNP55089 124 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 TMEM182Q6ZP80 229 aaPredicted RBP12.05□□□□□ -0.48
SCAF4-202ENST00000399804 OVCH2Q7RTZ1 564 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 DENND4AQ7Z401 1863 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 ABCD4O14678 606 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 NAT2P11245 290 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 HLA-DRB3P79483 266 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 IL13RA2Q14627 380 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 Q3ZCU0 254 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 ASPHD2Q6ICH7 369 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 DBX2Q6ZNG2 339 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 SLC36A1Q7Z2H8 476 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 RNF144BQ7Z419 303 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 S100PBPQ96BU1 408 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 ADGRG7Q96K78 797 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 PIGMQ9H3S5 423 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 C5orf66Q9H5L9 145 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 MED13LQ71F56 2210 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 C10orf142B7Z368 130 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 POLR2GP62487 172 aaKnown RBP eCLIP12.05□□□□□ -0.48
SCAF4-202ENST00000399804 BAXQ07812 192 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 ACSF3Q4G176 576 aaPredicted RBP12.05□□□□□ -0.48
SCAF4-202ENST00000399804 OR8G5Q8NG78 346 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 OR2W1Q9Y3N9 320 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 IGHV3OR15-7A0A075B7D8 119 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 A0A1W2PPV4 95 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 KCNAB3O43448 404 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 CA11O75493 328 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 CCL8P80075 99 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 WDFY1Q8IWB7 410 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 SFT2D1Q8WV19 159 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 DLL3Q9NYJ7 618 aa12.05□□□□□ -0.48
SCAF4-202ENST00000399804 CHD9Q3L8U1 2897 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 OR2H2O95918 312 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 CST4P01036 141 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 S100A9P06702 114 aaKnown RBP12.04□□□□□ -0.48
SCAF4-202ENST00000399804 LPAR6P43657 344 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 RNFT1Q5M7Z0 435 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 Q6ZRG5 221 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 WBP1Q96G27 269 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 NMES1Q9C002 83 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 KIAA2026Q5HYC2 2103 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 CECR9P0C854 216 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 CXCL2P19875 107 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 CLEC9AQ6UXN8 241 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 GLRX5Q86SX6 157 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 OR5T1Q8NG75 326 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 OR10X1Q8NGY0 326 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 ADAMTS17Q8TE56 1095 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 OR5P3Q8WZ94 311 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 TIMD4Q96H15 378 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 PSENENQ9NZ42 101 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 CACNG5Q9UF02 275 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 hCG_1809904A0A1W2PP81 198 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 A0A1W2PPE2 198 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 A0A1W2PR64 198 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 A0A1W2PRV1 198 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 FAM24AA6NFZ4 105 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 SIGLEC5O15389 551 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 FAM87AP0C7U9 286 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 CEBPDP49716 269 aaPredicted RBP12.04□□□□□ -0.48
SCAF4-202ENST00000399804 OR4A4PQ8NGN8 299 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 GPHA2Q96T91 129 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 PKIBQ9C010 78 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 TMEM231Q9H6L2 316 aa12.04□□□□□ -0.48
SCAF4-202ENST00000399804 PIEZO1Q92508 2521 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 CCL21O00585 134 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 TMPRSS2O15393 492 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 CD3EP07766 207 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms