RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 BARHL1Q9BZE3 327 aa13.49□□□□□ -0.25
APTR-201ENST00000398043 SLITRK2Q9H156 845 aa13.49□□□□□ -0.25
APTR-201ENST00000398043 C16orf95Q9H693 158 aa13.49□□□□□ -0.25
APTR-201ENST00000398043 PCDHB16Q9NRJ7 776 aa13.49□□□□□ -0.25
APTR-201ENST00000398043 MINOS1-NBL1R4GNA1 71 aa13.49□□□□□ -0.25
APTR-201ENST00000398043 MEIKINA0A087WXM9 373 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 NPIPB11E5RHQ5 1161 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 HAX1O00165 279 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 AWAT2Q6E213 333 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 SIGIRRQ6IA17 410 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 RTN4RL2Q86UN3 420 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 ABHD12Q8N2K0 398 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 WFDC12Q8WWY7 111 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 TMEM203Q969S6 136 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 FOXRED1Q96CU9 486 aaPredicted RBP13.48□□□□□ -0.25
APTR-201ENST00000398043 CYYR1Q96J86 154 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 Q96M66 194 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 GFI1Q99684 422 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 CCDC90BQ9GZT6 254 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 BANF2Q9H503 90 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 BEX1Q9HBH7 125 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 ZNF286AQ9HBT8 521 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 TCF7L1Q9HCS4 588 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 ACOT13Q9NPJ3 140 aa13.48□□□□□ -0.25
APTR-201ENST00000398043 PKD1L1Q8TDX9 2849 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 CLPSL1A2RUU4 121 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A10PA6NDY2 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A18PA6NE21 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A16PA6NEW6 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A20PA6NIJ5 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A7PA6NKC0 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A22PA8MWA6 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A12PA8MX19 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A5PA8MXJ8 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A23PA8MXZ1 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A15PP0C7V4 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A13PP0C7W8 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A14PP0C7W9 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 FAM90A24PP0C7X0 464 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 HSMCR30P0CW71 290 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 MGMTP16455 207 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 JUNBP17275 347 aaPredicted RBP13.47□□□□□ -0.25
APTR-201ENST00000398043 DYNLT3P51808 116 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 GABARAPL2P60520 117 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 EMX1Q04741 257 aaPredicted RBP13.47□□□□□ -0.25
APTR-201ENST00000398043 DYNC1I2Q13409 638 aaKnown RBP13.47□□□□□ -0.25
APTR-201ENST00000398043 SSX1Q16384 188 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 SSX2Q16385 188 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 OLFML2AQ68BL7 652 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 BRICD5Q6PL45 260 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 SHISA2Q6UWI4 295 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 CCBE1Q6UXH8 406 aaPredicted RBP13.47□□□□□ -0.25
APTR-201ENST00000398043 GAPTQ8N292 157 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 ZNF565Q8N9K5 539 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 CALYQ9NYX4 217 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 GHRLQ9UBU3 117 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 BLOC1S6Q9UL45 172 aa13.47□□□□□ -0.25
APTR-201ENST00000398043 TRAV39A0A0B4J263 110 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 LY6LH3BQJ8 138 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 CHST1O43916 411 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 MRPS14O60783 128 aaKnown RBP13.46□□□□□ -0.25
APTR-201ENST00000398043 IL1AP01583 271 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 PSMA1P25786 263 aaKnown RBP13.46□□□□□ -0.25
APTR-201ENST00000398043 GLP1RP43220 463 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 RAB13P51153 203 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 PROK1P58294 105 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 KRTAP10-3P60369 221 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 QRFPP83859 136 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 FABP5Q01469 135 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 TRAM1Q15629 374 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 LY6EQ16553 131 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 HSD17B12Q53GQ0 312 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 DHRS7BQ6IAN0 325 aaPredicted RBP13.46□□□□□ -0.25
APTR-201ENST00000398043 ZNF497Q6ZNH5 498 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 ZNF367Q7RTV3 350 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 MRGPRDQ8TDS7 321 aa13.46□□□□□ -0.25
APTR-201ENST00000398043 RRP15Q9Y3B9 282 aaKnown RBP13.46□□□□□ -0.25
APTR-201ENST00000398043 NBEAL1Q6ZS30 2694 aa13.46□□□□□ -0.26
APTR-201ENST00000398043 FAM172BPA6NC97 362 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 A6NDX4 124 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 C15orf65H3BRN8 121 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 SLC22A1O15245 554 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 MT-ND4P03905 459 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 VSIG8P0DPA2 414 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 HTR1DP28221 377 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 GABRA5P31644 462 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 SSTR5P35346 364 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 HLA-DRB5Q30154 266 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 ATAD3CQ5T2N8 411 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 GLT8D1Q68CQ7 371 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 LIAT1Q6ZQX7 453 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 OR10A7Q8NGE5 316 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 ZNF596Q8TC21 504 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 SELENOIQ9C0D9 397 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 SPACA1Q9HBV2 294 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 TCF19Q9Y242 345 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 HILPDAQ9Y5L2 63 aa13.45□□□□□ -0.26
APTR-201ENST00000398043 TMEM30CPA0ZSE6 113 aa13.44□□□□□ -0.26
APTR-201ENST00000398043 UBBP0CG47 229 aa13.44□□□□□ -0.26
APTR-201ENST00000398043 SRSF4Q08170 494 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms