RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 LY6EQ16553 131 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 PIGYQ3MUY2 71 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 JAGN1Q8N5M9 183 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 ZFP41Q8N8Y5 198 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 OR4P4Q8NGL7 312 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 PHYHIPQ92561 330 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 DPCDQ9BVM2 203 aaPredicted RBP11.26□□□□□ -0.61
SEC13-204ENST00000397099 ANKRD60Q9BZ19 345 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 TCF7L1Q9HCS4 588 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 CMYA5Q8N3K9 4069 aa11.26□□□□□ -0.61
SEC13-204ENST00000397099 TMEM30CPA0ZSE6 113 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 MEX3AA1L020 520 aaKnown RBP11.25□□□□□ -0.61
SEC13-204ENST00000397099 A6NDX4 124 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 CA11O75493 328 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 IL1AP01583 271 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 UBBP0CG47 229 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 CGB3P0DN86 165 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 CGB7P0DN87 165 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 SERPINA2P20848 420 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 MYF6P23409 242 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 MNDAP41218 407 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 GLP1RP43220 463 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 AQP4P55087 323 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 SLC22A6Q4U2R8 563 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 PRAMEF5Q5TYX0 476 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 RSBN1Q5VWQ0 802 aaPredicted RBP11.25□□□□□ -0.61
SEC13-204ENST00000397099 Q6ZTK2 550 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 SUMF2Q8NBJ7 301 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 OR13C5Q8NGS8 318 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 OR10K1Q8NGX5 313 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 OR9G1Q8NH87 305 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 PRSS22Q9GZN4 317 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 PPIL3Q9H2H8 161 aaKnown RBP11.25□□□□□ -0.61
SEC13-204ENST00000397099 ISYNA1Q9NPH2 558 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 CALYQ9NYX4 217 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 KIF25Q9UIL4 384 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 MRPS28Q9Y2Q9 187 aaKnown RBP11.25□□□□□ -0.61
SEC13-204ENST00000397099 HILPDAQ9Y5L2 63 aa11.25□□□□□ -0.61
SEC13-204ENST00000397099 TRAV8-7A0A075B6U6 113 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 PNMA8CA0A1B0GUJ8 204 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 MCRIP1C9JLW8 97 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 NPIPB11E5RHQ5 1161 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 BUB1B-PAK6H3BSN5 160 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 HSPB6O14558 160 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 GEMIN2O14893 280 aaKnown RBP11.24□□□□□ -0.61
SEC13-204ENST00000397099 PSMA1P25786 263 aaKnown RBP11.24□□□□□ -0.61
SEC13-204ENST00000397099 EFNB2P52799 333 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 SLC35A2P78381 396 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 DEFA6Q01524 100 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 C17orf58Q2M2W7 97 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 C2orf68Q2NKX9 166 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 HLA-DRB5Q30154 266 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 Q3ZCU0 254 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 AWAT2Q6E213 333 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 Q8N2B8 174 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 OR52M1Q8NGK5 317 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 CAPSLQ8WWF8 208 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 KIRREL1Q96J84 757 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 CST11Q9H112 138 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 MMP27Q9H306 513 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 DUSP21Q9H596 190 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 IDI2-AS1Q9NZ38 188 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 BLOC1S6Q9UL45 172 aa11.24□□□□□ -0.61
SEC13-204ENST00000397099 RGS10O43665 173 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 ORC5O43913 435 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 MMP23AO75900 390 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 MAS1P04201 325 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 HERPUD1Q15011 391 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 MED22Q15528 200 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 ACSM3Q53FZ2 586 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 ATAD3CQ5T2N8 411 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 GLT8D1Q68CQ7 371 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 TRAT1Q6PIZ9 186 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 GLIPR1L1Q6UWM5 242 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 UNQ9370/PRO34162Q6UXP9 181 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 DYNAPQ8N1N2 210 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 OR13A1Q8NGR1 328 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 NEK7Q8TDX7 302 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 NRG4Q8WWG1 115 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 UFD1Q92890 307 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 MMP28Q9H239 520 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 LIN7BQ9HAP6 207 aa11.23□□□□□ -0.61
SEC13-204ENST00000397099 RCC2Q9P258 522 aaKnown RBP11.23□□□□□ -0.61
SEC13-204ENST00000397099 J3QR06 171 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 M0QZK8 103 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 CHST1O43916 411 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 NFYBP25208 207 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 MADCAM1Q13477 382 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 IRF3Q14653 427 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 PLA1AQ53H76 456 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 RBM48Q5RL73 367 aaKnown RBP11.22□□□□□ -0.61
SEC13-204ENST00000397099 LDLRAD2Q5SZI1 272 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 TET2Q6N021 2002 aaPredicted RBP11.22□□□□□ -0.61
SEC13-204ENST00000397099 ZNF497Q6ZNH5 498 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 PRSS48Q7RTY5 328 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 ZNF554Q86TJ5 538 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 THNSL2Q86YJ6 484 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 C8orf31Q8N9H6 132 aa11.22□□□□□ -0.61
SEC13-204ENST00000397099 MUL1Q969V5 352 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms