RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SEC61A1P61619 476 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 HLA-DRB3P79483 266 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 HERPUD1Q15011 391 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 Q5BKY6 102 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 LIN54Q6MZP7 749 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 FAM90A1Q86YD7 464 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 OR4A4PQ8NGN8 299 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 PLPPR1Q8TBJ4 325 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 RNASE6Q93091 150 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 WDR89Q96FK6 387 aaPredicted RBP9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 SEBOXQ9HB31 216 aaPredicted RBP9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 COQ3Q9NZJ6 369 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 OR14J1Q9UGF5 321 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 PLCE1Q9P212 2302 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 TSPAN9O75954 239 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 ZNF205O95201 554 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 PPYP01298 95 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 AADACP22760 399 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 PLA2G5P39877 138 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 HERV-K104P61576 105 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 ADORA2A-AS1P86434 159 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 ADIPOQQ15848 244 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 PCSK4Q6UW60 755 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 SLC38A6Q8IZM9 456 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 TOMM40LQ969M1 308 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 PIK3IP1Q96FE7 263 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 TMEM246Q9BRR3 403 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 ESRP2Q9H6T0 727 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 IL19Q9UHD0 177 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 HSPB11Q9Y547 144 aa9.64□□□□□ -0.87
SMARCAL1-203ENST00000392128 IGKV1-6A0A0C4DH72 117 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 CRYM-AS1A6NIL9 109 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 RGS13O14921 159 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 ATXN7O15265 892 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 PSPNO60542 156 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 CRYZL1O95825 349 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 CD8AP01732 235 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 IGHV1-46P01743 117 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 RCC1P18754 421 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 NFYAP23511 347 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 KCNJ3P48549 501 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 CEBPDP49716 269 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 NCMAPQ5T1S8 102 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 LILRB4Q8NHJ6 448 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 COQ8AQ8NI60 647 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 ITLN1Q8WWA0 313 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 CABLES2Q9BTV7 478 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 MBNL3Q9NUK0 354 aaKnown RBP9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 PCDHB10Q9UN67 800 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 WIPI2Q9Y4P8 454 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 ATRXP46100 2492 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 FAM90A27PA6NNH2 459 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 TUSC2O75896 110 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 SNAPC5O75971 98 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 DIRAS3O95661 229 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 LHBP01229 141 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 ADH4P08319 380 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 PIGPP57054 158 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 FXYD4P59646 89 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 ATXN7L3Q14CW9 347 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 SLC9A3R2Q15599 337 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 SPRNQ5BIV9 151 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 KCTD9Q7L273 389 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 MOGAT3Q86VF5 341 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 SGPP2Q8IWX5 399 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 GCSAMQ8N6F7 178 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 ANGPTL6Q8NI99 470 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 GRPEL2Q8TAA5 225 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 RSRP1Q9BUV0 290 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 SLA2Q9H6Q3 261 aa9.63□□□□□ -0.87
SMARCAL1-203ENST00000392128 RFPL4AA6NLU0 287 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 NPIPB11E5RHQ5 1161 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 RFPL4AL1F8VTS6 287 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 BET1O15155 118 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 IFNA2P01563 188 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 OR4A8P0C604 315 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 EGR1P18146 543 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 TNFSF4P23510 183 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 TNFAIP6P98066 277 aaPredicted RBP9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 HOXA4Q00056 320 aaPredicted RBP9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 ANKRD55Q3KP44 614 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 ABCA11PQ4W5N1 156 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 SLC35E4Q6ICL7 350 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 ADAM5Q6NVV9 412 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 C5orf24Q7Z6I8 188 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 OR5T2Q8NGG2 359 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 ERGIC1Q969X5 290 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 LRRC46Q96FV0 321 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 DIRC2Q96SL1 478 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 GON7Q9BXV9 100 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 RAB18Q9NP72 206 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 TRAPPC2LQ9UL33 140 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 TRBV6-7A0A0A0MS04 114 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 TMEM30CPA0ZSE6 113 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 VSTM5A8MXK1 200 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 SHISA9B4DS77 424 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 SORDQ00796 357 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 PAX5Q02548 391 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 ASCC1Q8N9N2 400 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms