RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 AKAP6Q13023 2319 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 RPS10-NUDT3A0A1W2PQS6 291 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 SCAF4O95104 1147 aaKnown RBP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 ACKR3P25106 362 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 RPS10P46783 165 aaKnown RBP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 RPS11P62280 158 aaKnown RBP eCLIP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 AESQ08117 197 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 KCNMB1Q16558 191 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 VMA21Q3ZAQ7 101 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 CLLU1Q5K131 121 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 Q6ZT83 130 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 TMEM123Q8N131 208 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 KLHDC3Q9BQ90 382 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 ZNF251Q9BRH9 671 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 FAM24AA6NFZ4 105 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 CLPSP04118 112 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 POLR2GP62487 172 aaKnown RBP eCLIP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 MRPS11P82912 194 aaKnown RBP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 EFNB1P98172 346 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 RSPO4Q2I0M5 234 aaPredicted RBP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 MRPL24Q96A35 216 aaKnown RBP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 RNF122Q9H9V4 155 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 DIDO1Q9BTC0 2240 aaKnown RBP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 A0A0G2JK05 382 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 LOC390937A0A1W2PQ73 354 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 CDX4O14627 284 aaPredicted RBP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 RPS2P15880 293 aaKnown RBP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 HTD2P86397 168 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 ACTR3CQ9C0K3 210 aaPredicted RBP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 MBP02144 154 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 RAB13P51153 203 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 BTNL3Q6UXE8 466 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 BMPERQ8N8U9 685 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 OR5C1Q8NGR4 320 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 ADAMTS17Q8TE56 1095 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 RPEQ96AT9 228 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 SSX3Q99909 188 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 ZNF665Q9H7R5 613 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 TUBG2Q9NRH3 451 aa10.59□□□□□ -0.71
GABPB1-203ENST00000380877 TIMM8BQ9Y5J9 83 aaPredicted RBP10.59□□□□□ -0.71
GABPB1-203ENST00000380877 IGHV3OR15-7A0A075B7D8 119 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 TMEM14DPA8MWL7 114 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 AQP7O14520 342 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 VSIG10L2P0DP72 767 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 THBS3P49746 956 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 ACOT6Q3I5F7 207 aaPredicted RBP10.58□□□□□ -0.72
GABPB1-203ENST00000380877 TMEM255AQ5JRV8 349 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 ZNF826PQ6ZT77 177 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 DAZAP1Q96EP5 407 aaKnown RBP10.58□□□□□ -0.72
GABPB1-203ENST00000380877 FBXL17Q9UF56 701 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 UBE2L5PA0A1B0GUS4 154 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 F6UZH7 168 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 NEURL1O76050 574 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 FABP1P07148 127 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 COX7A1P24310 79 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 AQP3Q92482 292 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 ELF5Q9UKW6 265 aaPredicted RBP10.58□□□□□ -0.72
GABPB1-203ENST00000380877 PCNX1Q96RV3 2341 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 EFNA2O43921 213 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 ADH4P08319 380 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 PRDX2P32119 198 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 ADIRFQ15847 76 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 FAM122CQ6P4D5 195 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 IL34Q6ZMJ4 242 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 KLF14Q8TD94 323 aaPredicted RBP10.58□□□□□ -0.72
GABPB1-203ENST00000380877 NMES1Q9C002 83 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 FAM96BQ9Y3D0 163 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 WIPI2Q9Y4P8 454 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 OR5H1A6NKK0 313 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 UMAD1C9J7I0 102 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 ATP6V1G2-DDX39BF2Z307 99 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 FGF7P21781 194 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 TMEM267Q0VDI3 215 aaPredicted RBP10.58□□□□□ -0.72
GABPB1-203ENST00000380877 ZNF787Q6DD87 383 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 ADAM5Q6NVV9 412 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 OR8G5Q8NG78 346 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 OR2V2Q96R30 315 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 SOX7Q9BT81 388 aa10.58□□□□□ -0.72
GABPB1-203ENST00000380877 ZNF552Q9H707 407 aaPredicted RBP10.58□□□□□ -0.72
GABPB1-203ENST00000380877 MUC6Q6W4X9 2439 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 YIF1AO95070 293 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 METTL15P1P0C7V9 234 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 TAGLN2P37802 199 aaKnown RBP10.57□□□□□ -0.72
GABPB1-203ENST00000380877 LHX2P50458 406 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 TPRX1Q8N7U7 411 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 BORCS7Q96B45 105 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 SFXN3Q9BWM7 321 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 CA10Q9NS85 328 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 UQCC1Q9NVA1 299 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 PCNX2A6NKB5 2137 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 OR5G3P0C626 314 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 HIST2H3PS2Q5TEC6 136 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 LYZL2Q7Z4W2 148 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 ADTRPQ96IZ2 230 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 C20orf24Q9BUV8 137 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 PKIBQ9C010 78 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 MED9Q9NWA0 146 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 LIPGQ9Y5X9 500 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 NPTNQ9Y639 398 aa10.57□□□□□ -0.72
GABPB1-203ENST00000380877 FAM90A10PA6NDY2 464 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms