RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 GPR31O00270 319 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 NOVA1P51513 510 aaKnown RBP12.7□□□□□ -0.38
PRNP-201ENST00000379440 LUMP51884 338 aaPredicted RBP12.7□□□□□ -0.38
PRNP-201ENST00000379440 ERVS71-1P61550 626 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 TMEM211Q6ICI0 200 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 SAXO1Q8IYX7 474 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 GSKIPQ9P0R6 139 aa12.7□□□□□ -0.38
PRNP-201ENST00000379440 BCL2L11O43521 198 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 ZNF728P0DKX0 622 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 ECI1P42126 302 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 PIGPP57054 158 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 UBE2NP61088 152 aaKnown RBP12.69□□□□□ -0.38
PRNP-201ENST00000379440 CYCSP99999 105 aaKnown RBP12.69□□□□□ -0.38
PRNP-201ENST00000379440 TBC1D28Q2M2D7 210 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 VWA1Q6PCB0 445 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 IGF2-ASQ6U949 168 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 TMEM200AQ86VY9 491 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 SGPP2Q8IWX5 399 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 ZNF383Q8NA42 475 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 C9orf106Q8NAJ2 232 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 INO80EQ8NBZ0 244 aaPredicted RBP12.69□□□□□ -0.38
PRNP-201ENST00000379440 OR5L1Q8NGL2 311 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 ZNF471Q9BX82 626 aaPredicted RBP12.69□□□□□ -0.38
PRNP-201ENST00000379440 GLRX2Q9NS18 164 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 CRYM-AS1A6NIL9 109 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 IFNA10P01566 189 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 GLI4P10075 376 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 RBMXP38159 391 aaKnown RBP12.69□□□□□ -0.38
PRNP-201ENST00000379440 SP6Q3SY56 376 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 RRNAD1Q96FB5 475 aaKnown RBP12.69□□□□□ -0.38
PRNP-201ENST00000379440 TAAR6Q96RI8 345 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 OR2J1Q9GZK6 312 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 TAS2R3Q9NYW6 316 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 OR5AC2Q9NZP5 309 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 GAB2Q9UQC2 676 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 SHANK1Q9Y566 2161 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 BOD1L1Q8NFC6 3051 aa12.69□□□□□ -0.38
PRNP-201ENST00000379440 AQP7O14520 342 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 RHBDL1O75783 438 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 FOLR2P14207 255 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 KIR2DL2P43627 348 aaPredicted RBP12.68□□□□□ -0.38
PRNP-201ENST00000379440 NUTF2P61970 127 aaKnown RBP12.68□□□□□ -0.38
PRNP-201ENST00000379440 FOXF2Q12947 444 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 RBM39Q14498 530 aaKnown RBP12.68□□□□□ -0.38
PRNP-201ENST00000379440 PHLDA2Q53GA4 152 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 C17orf78Q8N4C9 275 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 C2orf50Q96LR7 162 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 DLL3Q9NYJ7 618 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 MPC1Q9Y5U8 109 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 TM4SF5O14894 197 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 PAX6P26367 422 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 TGFBR3Q03167 851 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 RAB32Q13637 225 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 GUSBP1Q15486 140 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 GABRA6Q16445 453 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 GUCA2BQ16661 112 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 UNQ6126/PRO20091Q6UXV3 157 aa12.68□□□□□ -0.38
PRNP-201ENST00000379440 UNKLQ9H9P5 680 aaKnown RBP12.68□□□□□ -0.38
PRNP-201ENST00000379440 ESPL1Q14674 2120 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 SMPD2O60906 423 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 UBA52P62987 128 aaKnown RBP12.67□□□□□ -0.38
PRNP-201ENST00000379440 USF2Q15853 346 aaPredicted RBP12.67□□□□□ -0.38
PRNP-201ENST00000379440 ALKBH6Q3KRA9 238 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 POC1AQ8NBT0 407 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 OR11L1Q8NGX0 322 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 S100PBPQ96BU1 408 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 SLC25A32Q9H2D1 315 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 C1orf123Q9NWV4 160 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 ARID1AO14497 2285 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 IGHV3-64DA0A0J9YX35 117 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A10PA6NDY2 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A18PA6NE21 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A16PA6NEW6 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A20PA6NIJ5 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A8PA6NJQ4 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A7PA6NKC0 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 ZNF891A8MT65 544 aaPredicted RBP12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A22PA8MWA6 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A12PA8MX19 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A5PA8MXJ8 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A23PA8MXZ1 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 F5H0A9 414 aaPredicted RBP12.67□□□□□ -0.38
PRNP-201ENST00000379440 AGFG2O95081 481 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A15PP0C7V4 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A13PP0C7W8 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A14PP0C7W9 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FAM90A24PP0C7X0 464 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 AADACP22760 399 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 GNG3P63215 75 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 ABCA11PQ4W5N1 156 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 Q6ZT83 130 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 FOXRED2Q8IWF2 684 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 NEK7Q8TDX7 302 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 RTN4IP1Q8WWV3 396 aaPredicted RBP12.67□□□□□ -0.38
PRNP-201ENST00000379440 CDH20Q9HBT6 801 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 SPACA1Q9HBV2 294 aa12.67□□□□□ -0.38
PRNP-201ENST00000379440 TRBV6-7A0A0A0MS04 114 aa12.66□□□□□ -0.38
PRNP-201ENST00000379440 MSGN1A6NI15 193 aa12.66□□□□□ -0.38
PRNP-201ENST00000379440 SCTP09683 121 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms