RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PHF1O43189 567 aaPredicted RBP10.35□□□□□ -0.75
NPHP4-202ENST00000378161 NEURL1O76050 574 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 MPZL1O95297 269 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 UTS2O95399 124 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 HIST1H1EP10412 219 aaKnown RBP10.35□□□□□ -0.75
NPHP4-202ENST00000378161 GNB3P16520 340 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 CLDN2P57739 230 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 DEFB110Q30KQ9 67 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 TMEM256Q8N2U0 113 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 SLC35A4Q96G79 324 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 BMFQ96LC9 184 aa10.35□□□□□ -0.75
NPHP4-202ENST00000378161 SAP30O75446 220 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 DCAF7P61962 342 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 MEP1BQ16820 701 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 TMEM156Q8N614 296 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 VN1R2Q8NFZ6 395 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 OR52E5Q8NH55 327 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 WDYHV1Q96HA8 205 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 Q96M85 177 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 TSSK2Q96PF2 358 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 ADOQ96SZ5 270 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 CITED2Q99967 270 aaPredicted RBP10.34□□□□□ -0.75
NPHP4-202ENST00000378161 KLRF1Q9NZS2 232 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 FRRS1LQ9P0K9 344 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 PILRBQ9UKJ0 227 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 SPAG17Q6Q759 2223 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 PRSS38A1L453 326 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 H0YGG7 62 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 SSSCA1O60232 199 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 HYPMO75409 117 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 SERF1AO75920 110 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 GLI4P10075 376 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 AADACP22760 399 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 OPRM1P35372 400 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 PPOXP50336 477 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 HHEXQ03014 270 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 C5orf17Q8NAS9 161 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 ZNF479Q96JC4 524 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 VN1R1Q9GZP7 353 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 KCNK15Q9H427 330 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 AKIRIN1Q9H9L7 192 aaPredicted RBP10.34□□□□□ -0.75
NPHP4-202ENST00000378161 CDH20Q9HBT6 801 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 CLDND1Q9NY35 253 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 SIGLEC7Q9Y286 467 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 RBBP6Q7Z6E9 1792 aaKnown RBP10.34□□□□□ -0.75
NPHP4-202ENST00000378161 OR2T8A6NH00 312 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 SNURFLB1AK76 121 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 CA1P00915 261 aaPredicted RBP10.34□□□□□ -0.75
NPHP4-202ENST00000378161 TIMP1P01033 207 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 CRYBA2P53672 197 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 SNU13P55769 128 aaKnown RBP10.34□□□□□ -0.75
NPHP4-202ENST00000378161 C1orf61Q13536 156 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 COX19Q49B96 90 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 COA6Q5JTJ3 125 aaKnown RBP10.34□□□□□ -0.75
NPHP4-202ENST00000378161 FAM222BQ8WU58 562 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 NEIL1Q96FI4 390 aaPredicted RBP10.34□□□□□ -0.75
NPHP4-202ENST00000378161 DCBLD2Q96PD2 775 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 TMEM59Q9BXS4 323 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 METTL7AQ9H8H3 244 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 KCNIP2Q9NS61 270 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 SLC22A13Q9Y226 551 aa10.34□□□□□ -0.75
NPHP4-202ENST00000378161 A0A1W2PPV4 95 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 C7orf71A4D174 169 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 E9PQ18 207 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 IGLC2P0DOY2 106 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 IGLC3P0DOY3 106 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 ZNF708P17019 499 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 TTC32Q5I0X7 151 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 TEX43Q6ZNM6 134 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 OR13G1Q8NGZ3 307 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 RAB37Q96AX2 223 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 ZG16BQ96DA0 208 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 TAS2R4Q9NYW5 299 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 LOC105371242A0A075B767 164 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 C9orf172C9J069 976 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 METAP1P53582 386 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 ZNF77Q15935 545 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 MUC15Q8N387 334 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 C19orf53Q9UNZ5 99 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-202ENST00000378161 LRP12Q9Y561 859 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 MIA3Q5JRA6 1907 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 PPIAL4CA0A0B4J2A2 164 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 S1PR2O95136 353 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 PPIAL4GP0DN37 164 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 RNASEKQ6P5S7 137 aaKnown RBP10.33□□□□□ -0.76
NPHP4-202ENST00000378161 OR2L13Q8N349 312 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 POC1AQ8NBT0 407 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 OR4D11Q8NGI4 311 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 PFN4Q8NHR9 129 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 CNRIP1Q96F85 164 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-202ENST00000378161 CISD1Q9NZ45 108 aaKnown RBP10.33□□□□□ -0.76
NPHP4-202ENST00000378161 MTCH1Q9NZJ7 389 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 ZNF319Q9P2F9 582 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 H3BUT2 72 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 PVRP15151 417 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 FASLGP48023 281 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 RPS15P62841 145 aaKnown RBP10.33□□□□□ -0.76
NPHP4-202ENST00000378161 ICAM4Q14773 271 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 SLC22A24Q8N4F4 322 aa10.33□□□□□ -0.76
NPHP4-202ENST00000378161 KCNG3Q8TAE7 436 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms