RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 DYNAPQ8N1N2 210 aa10.58□□□□□ -0.72
CLCN6-205ENST00000376492 ZFP41Q8N8Y5 198 aa10.58□□□□□ -0.72
CLCN6-205ENST00000376492 TMEM185AQ8NFB2 350 aa10.58□□□□□ -0.72
CLCN6-205ENST00000376492 AP3S1Q92572 193 aa10.58□□□□□ -0.72
CLCN6-205ENST00000376492 TMEM203Q969S6 136 aa10.58□□□□□ -0.72
CLCN6-205ENST00000376492 SLC25A46Q96AG3 418 aa10.58□□□□□ -0.72
CLCN6-205ENST00000376492 KCTD12Q96CX2 325 aaKnown RBP10.58□□□□□ -0.72
CLCN6-205ENST00000376492 NXF2Q9GZY0 626 aaKnown RBP10.58□□□□□ -0.72
CLCN6-205ENST00000376492 RHOFQ9HBH0 211 aa10.58□□□□□ -0.72
CLCN6-205ENST00000376492 EXOSC4Q9NPD3 245 aaKnown RBP10.58□□□□□ -0.72
CLCN6-205ENST00000376492 CKLFQ9UBR5 152 aa10.58□□□□□ -0.72
CLCN6-205ENST00000376492 A0A075B6Q4 140 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 TRBV23-1A0A0A0MS06 115 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 IGKV1-12A0A0C4DH73 117 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 WI2-2373I1.2A0A1W2PRP0 233 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 KDM4BO94953 1096 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 IGKV1D-12P01611 117 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 ALDOBP05062 364 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 CHRM2P08172 466 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 SRMP19623 302 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 RAB3AP20336 220 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 NPBWR2P48146 333 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 SOX2P48431 317 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 POU3F4P49335 361 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 RORCP51449 518 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 KRTAP10-11P60412 298 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 NCS1P62166 190 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 KISS1Q15726 138 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 TMEM95Q3KNT9 176 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 C22orf42Q6IC83 251 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 FAM58AQ8N1B3 248 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 C11orf42Q8N5U0 333 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 ACOT12Q8WYK0 555 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 TMEM106AQ96A25 262 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 FOXRED1Q96CU9 486 aaPredicted RBP10.57□□□□□ -0.72
CLCN6-205ENST00000376492 SPACA5Q96QH8 159 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 WNT10AQ9GZT5 417 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 OR14J1Q9UGF5 321 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 TCF19Q9Y242 345 aa10.57□□□□□ -0.72
CLCN6-205ENST00000376492 PNMA8CA0A1B0GUJ8 204 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 K7N7A8 449 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 ZNF737O75373 536 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 TK1P04183 234 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 HCKP08631 526 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 ZNF182P17025 639 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-205ENST00000376492 BCL3P20749 454 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 CEBPDP49716 269 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-205ENST00000376492 ZP1P60852 638 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 SPCS2Q15005 226 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 ZNF146Q15072 292 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 DEFB121Q5J5C9 76 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 NKAIN3Q8N8D7 197 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 WFDC9Q8NEX5 89 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 EMG1Q92979 244 aaKnown RBP10.56□□□□□ -0.72
CLCN6-205ENST00000376492 RFT1Q96AA3 541 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 CMTM3Q96MX0 182 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 HMG20AQ9NP66 347 aa10.56□□□□□ -0.72
CLCN6-205ENST00000376492 RBFOX1Q9NWB1 397 aaKnown RBP10.56□□□□□ -0.72
CLCN6-205ENST00000376492 A6NDX4 124 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 VGLL3A8MV65 326 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 MAGEB3O15480 346 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 PEX14O75381 377 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 CCL3L1P16619 93 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 IGFBP3P17936 291 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-205ENST00000376492 CALRP27797 417 aaKnown RBP10.55□□□□□ -0.72
CLCN6-205ENST00000376492 RPS19P39019 145 aaKnown RBP10.55□□□□□ -0.72
CLCN6-205ENST00000376492 COL10A1Q03692 680 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 SPIN3Q5JUX0 258 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 ZNF782Q6ZMW2 699 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-205ENST00000376492 DTX3Q8N9I9 347 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 PXT1Q8NFP0 134 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 OR4M1Q8NGD0 313 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 OR52N4Q8NGI2 321 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 OR51A2Q8NGJ7 313 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 CPNE2Q96FN4 548 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-205ENST00000376492 SNX22Q96L94 193 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 OR14A2Q96R54 314 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 SLIRPQ9GZT3 109 aaKnown RBP10.55□□□□□ -0.72
CLCN6-205ENST00000376492 HEXA-AS1Q9H8Q6 139 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 TMEM138Q9NPI0 162 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 TAS2R4Q9NYW5 299 aa10.55□□□□□ -0.72
CLCN6-205ENST00000376492 TMEM82A0PJX8 343 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 FAM90A8PA6NJQ4 464 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 NOTOA8MTQ0 251 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 CDRT1O95170 752 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 HAND1O96004 215 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 TMEM225BP0DP42 221 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 RAB3BP20337 219 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 SDC2P34741 201 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 LGALS4P56470 323 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 LSM3P62310 102 aaKnown RBP10.54□□□□□ -0.72
CLCN6-205ENST00000376492 RPL31P62899 125 aaKnown RBP10.54□□□□□ -0.72
CLCN6-205ENST00000376492 BLCAPP62952 87 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 LDLRAD2Q5SZI1 272 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 TMEM200BQ69YZ2 307 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 ELP2Q6IA86 826 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 ASCL4Q6XD76 172 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 OR5D18Q8NGL1 313 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 OR13C5Q8NGS8 318 aa10.54□□□□□ -0.72
CLCN6-205ENST00000376492 NDNFQ8TB73 568 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms