RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SCTP09683 121 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 HKR1P10072 659 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 IGHV1-2P23083 117 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 EIF2S3LQ2VIR3 472 aaKnown RBP10.31□□□□□ -0.76
HMGCL-202ENST00000374487 SUMF2Q8NBJ7 301 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 GLYATL2Q8WU03 294 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 SECTM1Q8WVN6 248 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 PIGMQ9H3S5 423 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 RIMS4Q9H426 269 aaPredicted RBP10.31□□□□□ -0.76
HMGCL-202ENST00000374487 PCDHB10Q9UN67 800 aa10.31□□□□□ -0.76
HMGCL-202ENST00000374487 TRDCB7Z8K6 153 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 MPPED1O15442 326 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 CELA3BP08861 270 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 ZNF14P17017 642 aaPredicted RBP10.3□□□□□ -0.76
HMGCL-202ENST00000374487 PPP1CBP62140 327 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 EIF5AL1Q6IS14 154 aaKnown RBP10.3□□□□□ -0.76
HMGCL-202ENST00000374487 MEX3BQ6ZN04 569 aaKnown RBP10.3□□□□□ -0.76
HMGCL-202ENST00000374487 FAM185AQ8N0U4 392 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 LRTM2Q8N967 370 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 RDH5Q92781 318 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 MARC2Q969Z3 335 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 NARS2Q96I59 477 aaKnown RBP10.3□□□□□ -0.76
HMGCL-202ENST00000374487 RTL8AQ9BWD3 113 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 OR2J1Q9GZK6 312 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 CLCF1Q9UBD9 225 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 SPEF1Q9Y4P9 236 aa10.3□□□□□ -0.76
HMGCL-202ENST00000374487 C3orf85A0A1B0GTC6 90 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 J3QW42 95 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 CTXN2P0C2S0 81 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 HOXC12P31275 282 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 OR2A2Q6IF42 318 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 FBXW12Q6X9E4 464 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 Q6ZT83 130 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 STPG2Q8N412 459 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 C17orf78Q8N4C9 275 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 OR1S2Q8NGQ3 325 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 C17orf50Q8WW18 174 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 MSI2Q96DH6 328 aaKnown RBP10.29□□□□□ -0.76
HMGCL-202ENST00000374487 C18orf12Q96KH6 178 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 PKIBQ9C010 78 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 OR51I2Q9H344 312 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 TAF9BQ9HBM6 251 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 ZFP57Q9NU63 452 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 ATP23Q9Y6H3 246 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 H7C1Q1 480 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 J3QT63 122 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 DEGS1O15121 323 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 FGF16O43320 207 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 RHBDL1O75783 438 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 APOC3P02656 99 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 MBPP02686 304 aaPredicted RBP10.29□□□□□ -0.76
HMGCL-202ENST00000374487 ZNF44P15621 663 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 GNRHRP30968 328 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 SRSF1Q07955 248 aaKnown RBP eCLIP10.29□□□□□ -0.76
HMGCL-202ENST00000374487 RPL7L1Q6DKI1 246 aaKnown RBP10.29□□□□□ -0.76
HMGCL-202ENST00000374487 C5orf24Q7Z6I8 188 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 MYPOPQ86VE0 399 aaPredicted RBP10.29□□□□□ -0.76
HMGCL-202ENST00000374487 TP53RKQ96S44 253 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 PLEKHA2Q9HB19 425 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 UBE2J1Q9Y385 318 aaPredicted RBP10.29□□□□□ -0.76
HMGCL-202ENST00000374487 TMED3Q9Y3Q3 217 aa10.29□□□□□ -0.76
HMGCL-202ENST00000374487 HELZ2Q9BYK8 2649 aaKnown RBP10.29□□□□□ -0.76
HMGCL-202ENST00000374487 DOCK7Q96N67 2140 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 ZNF705EA8MWA4 302 aaPredicted RBP10.28□□□□□ -0.76
HMGCL-202ENST00000374487 E5RGE8 158 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 AQP7O14520 342 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 SMPD2O60906 423 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 SRPXP78539 464 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 IL13RA2Q14627 380 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 GABRA6Q16445 453 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 TMEM268Q5VZI3 342 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 GTF3AQ92664 365 aaKnown RBP10.28□□□□□ -0.76
HMGCL-202ENST00000374487 SARAFQ96BY9 339 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 TMEM100Q9NV29 134 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 GLS2Q9UI32 602 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 NSG2Q9Y328 171 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 TRAV24A0A0B4J272 114 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 GPR31O00270 319 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 JTBO76095 146 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 HOXD4P09016 255 aaPredicted RBP10.28□□□□□ -0.76
HMGCL-202ENST00000374487 UCP2P55851 309 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 TMEM33P57088 247 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 BTN1A1Q13410 526 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 ZNF324BQ6AW86 544 aaPredicted RBP10.28□□□□□ -0.76
HMGCL-202ENST00000374487 FAM180AQ6UWF9 173 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 TBC1D26Q86UD7 250 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 ZNF695Q8IW36 515 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 CMTM1Q8IZ96 169 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 SLC35G3Q8N808 338 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 BPIFCQ8NFQ6 507 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 OR1J1Q8NGS3 322 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 PRR7Q8TB68 274 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 TMEM222Q9H0R3 208 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 POLDIP2Q9Y2S7 368 aa10.28□□□□□ -0.76
HMGCL-202ENST00000374487 ARHGAP21Q5T5U3 1957 aa10.27□□□□□ -0.76
HMGCL-202ENST00000374487 RAB19A4D1S5 217 aa10.27□□□□□ -0.77
HMGCL-202ENST00000374487 LRP5LA4QPB2 252 aa10.27□□□□□ -0.77
HMGCL-202ENST00000374487 ST8SIA3O43173 380 aa10.27□□□□□ -0.77
HMGCL-202ENST00000374487 GLAP06280 429 aa10.27□□□□□ -0.77
HMGCL-202ENST00000374487 RNF224P0DH78 156 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms