RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 SLC9A3R2Q15599 337 aa13.55□□□□□ -0.24
C9orf78-201ENST00000372447 MPV17LQ2QL34 196 aa13.55□□□□□ -0.24
C9orf78-201ENST00000372447 DHRS11Q6UWP2 260 aa13.55□□□□□ -0.24
C9orf78-201ENST00000372447 TMUB2Q71RG4 321 aa13.55□□□□□ -0.24
C9orf78-201ENST00000372447 LRP11Q86VZ4 500 aa13.55□□□□□ -0.24
C9orf78-201ENST00000372447 COQ8AQ8NI60 647 aa13.55□□□□□ -0.24
C9orf78-201ENST00000372447 PKIBQ9C010 78 aa13.55□□□□□ -0.24
C9orf78-201ENST00000372447 LIME1Q9H400 295 aa13.55□□□□□ -0.24
C9orf78-201ENST00000372447 PLK3Q9H4B4 646 aa13.55□□□□□ -0.24
C9orf78-201ENST00000372447 COMMD9Q9P000 198 aa13.55□□□□□ -0.24
C9orf78-201ENST00000372447 SHPKQ9UHJ6 478 aa13.55□□□□□ -0.24
C9orf78-201ENST00000372447 DANCRP0C864 163 aa13.54□□□□□ -0.24
C9orf78-201ENST00000372447 RAC2P15153 192 aa13.54□□□□□ -0.24
C9orf78-201ENST00000372447 RPA2P15927 270 aa13.54□□□□□ -0.24
C9orf78-201ENST00000372447 EXOSC2Q13868 293 aaKnown RBP13.54□□□□□ -0.24
C9orf78-201ENST00000372447 C1orf174Q8IYL3 243 aa13.54□□□□□ -0.24
C9orf78-201ENST00000372447 KLF14Q8TD94 323 aaPredicted RBP13.54□□□□□ -0.24
C9orf78-201ENST00000372447 NRGNQ92686 78 aa13.54□□□□□ -0.24
C9orf78-201ENST00000372447 MRPL37Q9BZE1 423 aaKnown RBP13.54□□□□□ -0.24
C9orf78-201ENST00000372447 OR51I2Q9H344 312 aa13.54□□□□□ -0.24
C9orf78-201ENST00000372447 RCC2Q9P258 522 aaKnown RBP13.54□□□□□ -0.24
C9orf78-201ENST00000372447 CSMD2Q7Z408 3487 aa13.54□□□□□ -0.24
C9orf78-201ENST00000372447 CTSDP07339 412 aaPredicted RBP13.53□□□□□ -0.24
C9orf78-201ENST00000372447 ZNF250P15622 560 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 RPS2P15880 293 aaKnown RBP13.53□□□□□ -0.24
C9orf78-201ENST00000372447 PRKACAP17612 351 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 SERPINF1P36955 418 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 MPV17P39210 176 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 ZNF718Q3SXZ3 478 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 TMEM65Q6PI78 240 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 Q6ZPA2 131 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 LINC00596Q86U02 117 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 OR8H3Q8N146 312 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 MUC15Q8N387 334 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 PPP1R1CQ8WVI7 109 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 MRPL24Q96A35 216 aaKnown RBP13.53□□□□□ -0.24
C9orf78-201ENST00000372447 MICU1Q9BPX6 476 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 RTL8AQ9BWD3 113 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 IL36RNQ9UBH0 155 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 DUSP13Q9UII6 198 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 APCP25054 2843 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 C13orf42A0A1B0GVH6 325 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 C5orf51A6NDU8 294 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 VSTM5A8MXK1 200 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 CFDP00746 253 aaPredicted RBP13.53□□□□□ -0.24
C9orf78-201ENST00000372447 KNG1P01042 644 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 SOD3P08294 240 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 SLC25A4P12235 298 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 SELEP16581 610 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 TUBG1P23258 451 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 IKZF1Q13422 519 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 MST1LQ2TV78 715 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 ANKRD55Q3KP44 614 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 MBNL2Q5VZF2 373 aaKnown RBP13.53□□□□□ -0.24
C9orf78-201ENST00000372447 C11orf87Q6NUJ2 197 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 GSG1LQ6UXU4 331 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 ZNF546Q86UE3 836 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 SYT3Q9BQG1 590 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 MFFQ9GZY8 342 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 ARL6Q9H0F7 186 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 CHMP1AQ9HD42 196 aaPredicted RBP13.53□□□□□ -0.24
C9orf78-201ENST00000372447 RAB18Q9NP72 206 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 TUBG2Q9NRH3 451 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 UBQLN2Q9UHD9 624 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 LAMP3Q9UQV4 416 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 MAB21L2Q9Y586 359 aa13.53□□□□□ -0.24
C9orf78-201ENST00000372447 IQCF6A8MYZ5 107 aa13.52□□□□□ -0.25
C9orf78-201ENST00000372447 J3QT63 122 aa13.52□□□□□ -0.25
C9orf78-201ENST00000372447 GCH1P30793 250 aa13.52□□□□□ -0.25
C9orf78-201ENST00000372447 PSG7Q13046 419 aa13.52□□□□□ -0.25
C9orf78-201ENST00000372447 LRRC37A5PQ49AS3 106 aa13.52□□□□□ -0.25
C9orf78-201ENST00000372447 ZNF488Q96MN9 340 aa13.52□□□□□ -0.25
C9orf78-201ENST00000372447 CACNA1DQ01668 2161 aa13.52□□□□□ -0.25
C9orf78-201ENST00000372447 RAI1Q7Z5J4 1906 aaPredicted RBP13.52□□□□□ -0.25
C9orf78-201ENST00000372447 POLQO75417 2590 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 IGLV3-9A0A075B6K5 115 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 RP2O75695 350 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 IL13RA2Q14627 380 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 SRSF7Q16629 238 aaKnown RBP eCLIP13.51□□□□□ -0.25
C9orf78-201ENST00000372447 SWI5Q1ZZU3 235 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 ALKBH6Q3KRA9 238 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 FAM76BQ5HYJ3 339 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 Q6ZS49 121 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 FAM58AQ8N1B3 248 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 NMES1Q9C002 83 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 WDR13Q9H1Z4 485 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 RHOFQ9HBH0 211 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 SPACA1Q9HBV2 294 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 PRR13Q9NZ81 148 aa13.51□□□□□ -0.25
C9orf78-201ENST00000372447 LRP5LA4QPB2 252 aa13.5□□□□□ -0.25
C9orf78-201ENST00000372447 RHBDL1O75783 438 aa13.5□□□□□ -0.25
C9orf78-201ENST00000372447 NAPSAO96009 420 aa13.5□□□□□ -0.25
C9orf78-201ENST00000372447 IFNA2P01563 188 aa13.5□□□□□ -0.25
C9orf78-201ENST00000372447 ZNF728P0DKX0 622 aa13.5□□□□□ -0.25
C9orf78-201ENST00000372447 DUSP1P28562 367 aa13.5□□□□□ -0.25
C9orf78-201ENST00000372447 FCGR2CP31995 323 aa13.5□□□□□ -0.25
C9orf78-201ENST00000372447 KLF3P57682 345 aaPredicted RBP13.5□□□□□ -0.25
C9orf78-201ENST00000372447 CYCSP99999 105 aaKnown RBP13.5□□□□□ -0.25
C9orf78-201ENST00000372447 EFNB3Q15768 340 aa13.5□□□□□ -0.25
C9orf78-201ENST00000372447 C20orf204Q6ZNR8 217 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms