RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ZNF418Q8TF45 676 aaPredicted RBP9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 SNAPC3Q92966 411 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 MED30Q96HR3 178 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 PRRT1Q99946 306 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 CMSS1Q9BQ75 279 aaKnown RBP9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 NRIP2Q9BQI9 281 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 SULT4A1Q9BR01 284 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 FAAP24Q9BTP7 215 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 ZNF442Q9H7R0 627 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 SPACA1Q9HBV2 294 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 MYOZ1Q9NP98 299 aaPredicted RBP9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 AK3Q9UIJ7 227 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 FZR1Q9UM11 496 aa9.41□□□□□ -0.9
CSNK1E-202ENST00000366216 M0QYG6 137 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 RHBDL1O75783 438 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 IL5P05113 134 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 FCER2P06734 321 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 PRKACAP17612 351 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 HRH1P35367 487 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 SNU13P55769 128 aaKnown RBP9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 MRPS15P82914 257 aaKnown RBP9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 SCGB2A2Q13296 93 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 MAB21L1Q13394 359 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 SRSF7Q16629 238 aaKnown RBP eCLIP9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 MST1LQ2TV78 715 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 OR52W1Q6IF63 320 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 SHISA2Q6UWI4 295 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 AKAP14Q86UN6 197 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 C11orf53Q8IXP5 236 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 ARRDC1Q8N5I2 433 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 POC1AQ8NBT0 407 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 BEST4Q8NFU0 473 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 GTF3AQ92664 365 aaKnown RBP9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 HPS1Q92902 700 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 MRPL24Q96A35 216 aaKnown RBP9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 SLC6A7Q99884 636 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 GINS4Q9BRT9 223 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 ZNF747Q9BV97 191 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 BPESC1Q9GZL8 116 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 GHITMQ9H3K2 345 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 HES4Q9HCC6 221 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 ZNF581Q9P0T4 197 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 DUSP13Q9UII6 198 aa9.4□□□□□ -0.9
CSNK1E-202ENST00000366216 PLSCR5A0PG75 271 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 F5H5P2 479 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 CDIPTO14735 213 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 ARPC1BO15143 372 aaKnown RBP9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 IFNA6P05013 189 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 GRPP07492 148 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 HNRNPCP07910 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 AMY2BP19961 511 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 RAB25P57735 213 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 HILS1P60008 231 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 ZNF146Q15072 292 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 MICBQ29980 383 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 C11orf91Q3C1V1 193 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 ATAD3CQ5T2N8 411 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 METTL11BQ5VVY1 283 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 IDO2Q6ZQW0 420 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 Q6ZS49 121 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 LRP11Q86VZ4 500 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 OR5AP2Q8NGF4 316 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 OR5H2Q8NGV7 314 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 OR10Z1Q8NGY1 313 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 GIMAP1Q8WWP7 306 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 CYYR1Q96J86 154 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 ZNF488Q96MN9 340 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 ST6GALNAC5Q9BVH7 336 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 ALX4Q9H161 411 aaPredicted RBP9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 MSL2Q9HCI7 577 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 CA10Q9NS85 328 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 PCDHB10Q9UN67 800 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 FLVCR2Q9UPI3 526 aa9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 KMT2CQ8NEZ4 4911 aaKnown RBP9.39□□□□□ -0.91
CSNK1E-202ENST00000366216 SNRPGP15A8MWD9 76 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 VSTM5A8MXK1 200 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 MCRIP1C9JLW8 97 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 PMP2P02689 132 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 FCGR3AP08637 254 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 APOBEC3AP31941 199 aaPredicted RBP9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 CFHR2P36980 270 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 OR3A3P47888 321 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 DVL1P1P54792 670 aaPredicted RBP9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 RRAS2P62070 204 aaPredicted RBP9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 IKZF1Q13422 519 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 GRK1Q15835 563 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 SPIN3Q5JUX0 258 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 Q6P435 159 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 VHLLQ6RSH7 139 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 FIP1L1Q6UN15 594 aaKnown RBP9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 GLDNQ6ZMI3 551 aaPredicted RBP9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 TMEM17Q86X19 198 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 BATF2Q8N1L9 274 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 ZDHHC22Q8N966 263 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 OR2Z1Q8NG97 314 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 OR13C8Q8NGS7 320 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 OR6F1Q8NGZ6 308 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 SYT3Q9BQG1 590 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 HDHD3Q9BSH5 251 aaPredicted RBP9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 MRPL37Q9BZE1 423 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms