RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 UCP3P55916 312 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 FAM3BP58499 235 aaPredicted RBP9.97□□□□□ -0.81
CNOT3-202ENST00000358389 DEGS2Q6QHC5 323 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 SPTSSAQ969W0 71 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 P4HTMQ9NXG6 502 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 USP34Q70CQ2 3546 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 ESPL1Q14674 2120 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 TRBV24-1A0A075B6N3 115 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 SPRY1O43609 319 aaPredicted RBP9.97□□□□□ -0.81
CNOT3-202ENST00000358389 HIST1H3AP68431 136 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 HSF1Q00613 529 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.97□□□□□ -0.81
CNOT3-202ENST00000358389 DPPA3Q6W0C5 159 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 OR2T10Q8NGZ9 312 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 RNASEH2CQ8TDP1 164 aaKnown RBP9.97□□□□□ -0.81
CNOT3-202ENST00000358389 LHX4Q969G2 390 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 VAMP8Q9BV40 100 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 ZNF286AQ9HBT8 521 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 SLC39A9Q9NUM3 307 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 OBP2AQ9NY56 170 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 A0A1W2PNR3 127 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 CHST1O43916 411 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 GNB2P62879 340 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 GABREP78334 506 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 VN1R17PQ8TDU5 208 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 LPAR2Q9HBW0 351 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 SDF2L1Q9HCN8 221 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 KLHL13Q9P2N7 655 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 POLR3KQ9Y2Y1 108 aaPredicted RBP9.97□□□□□ -0.81
CNOT3-202ENST00000358389 PITX3O75364 302 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 SCRG1O75711 98 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 OR2J2O76002 312 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 ZFAND5O76080 213 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 HNF1AP20823 631 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 ACOT6Q3I5F7 207 aaPredicted RBP9.97□□□□□ -0.81
CNOT3-202ENST00000358389 KIAA0895LQ68EN5 471 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 OR6C1Q96RD1 312 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 TXN2Q99757 166 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 PPIAL4AQ9Y536 164 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 TRAPPC1Q9Y5R8 145 aa9.97□□□□□ -0.81
CNOT3-202ENST00000358389 IGHV3-64DA0A0J9YX35 117 aa9.96□□□□□ -0.81
CNOT3-202ENST00000358389 SHISA8B8ZZ34 492 aa9.96□□□□□ -0.81
CNOT3-202ENST00000358389 CEACAM6P40199 344 aa9.96□□□□□ -0.81
CNOT3-202ENST00000358389 CNN1P51911 297 aaKnown RBP9.96□□□□□ -0.81
CNOT3-202ENST00000358389 C1orf194Q5T5A4 169 aa9.96□□□□□ -0.81
CNOT3-202ENST00000358389 LILRA6Q6PI73 481 aa9.96□□□□□ -0.81
CNOT3-202ENST00000358389 SLC25A26Q70HW3 274 aa9.96□□□□□ -0.81
CNOT3-202ENST00000358389 OR4F5Q8NH21 305 aa9.96□□□□□ -0.81
CNOT3-202ENST00000358389 SLC46A1Q96NT5 459 aa9.96□□□□□ -0.81
CNOT3-202ENST00000358389 OR4F4Q96R69 305 aa9.96□□□□□ -0.81
CNOT3-202ENST00000358389 FAM103A1Q9BTL3 118 aaKnown RBP9.96□□□□□ -0.81
CNOT3-202ENST00000358389 CTDSP1Q9GZU7 261 aa9.96□□□□□ -0.81
CNOT3-202ENST00000358389 ANKUB1A6NFN9 424 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 SERPINE2P07093 398 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 LINC00614P0C842 121 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 S100A7P31151 101 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 PRSS8Q16651 343 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 FAM78BQ5VT40 261 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 PTPMT1Q8WUK0 201 aaPredicted RBP9.96□□□□□ -0.82
CNOT3-202ENST00000358389 RPRMQ9NS64 109 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 PIGLQ9Y2B2 252 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 PHF3Q92576 2039 aaKnown RBP9.96□□□□□ -0.82
CNOT3-202ENST00000358389 TOX3O15405 576 aaPredicted RBP9.96□□□□□ -0.82
CNOT3-202ENST00000358389 RAB7AP51149 207 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 FAM90A2PQ658T7 463 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 KCNIP4Q6PIL6 250 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 NAT6Q93015 286 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 ACY3Q96HD9 319 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 TP53RKQ96S44 253 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 SPOCK3Q9BQ16 436 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 OR2J1Q9GZK6 312 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 Q9N2K0 584 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 GLRX2Q9NS18 164 aa9.96□□□□□ -0.82
CNOT3-202ENST00000358389 TIMM8BQ9Y5J9 83 aaPredicted RBP9.96□□□□□ -0.82
CNOT3-202ENST00000358389 DOCK11Q5JSL3 2073 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 ACACAQ13085 2346 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 SHISA7A6NL88 538 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 BMP5P22003 454 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 MALLQ13021 153 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 THEM4Q5T1C6 240 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 DOK3Q7L591 496 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 MRPL21Q7Z2W9 205 aaKnown RBP9.95□□□□□ -0.82
CNOT3-202ENST00000358389 ZNF573Q86YE8 665 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 CALHM1Q8IU99 346 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 NAT8Q9UHE5 227 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 A6NCN8 305 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 ZNF737O75373 536 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 EFEMP2O95967 443 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 IAPPP10997 89 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 CHRNB4P30926 498 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 COL5A1-AS1Q5SY13 56 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 H1FNTQ75WM6 255 aaPredicted RBP9.95□□□□□ -0.82
CNOT3-202ENST00000358389 LYPD6Q86Y78 171 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 VPS25Q9BRG1 176 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 NUDT16L1Q9BRJ7 211 aaKnown RBP9.95□□□□□ -0.82
CNOT3-202ENST00000358389 RBKSQ9H477 322 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 C3orf85A0A1B0GTC6 90 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 GRIFINA4D1Z8 144 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 MAP1LC3B2A6NCE7 125 aa9.95□□□□□ -0.82
CNOT3-202ENST00000358389 LRRC3CA6NJW4 275 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms