RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 GFRA3O60609 400 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TUSC2O75896 110 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 IFNA21P01568 189 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 RLN2P04090 185 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ACAA1P09110 424 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 BMP5P22003 454 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SPIN3Q5JUX0 258 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 GGNBP1Q5YKI7 109 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PRSS54Q6PEW0 395 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PCSK4Q6UW60 755 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 DOLPP1Q86YN1 238 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 GLYATL2Q8WU03 294 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ST8SIA2Q92186 375 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 RRNAD1Q96FB5 475 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 HES4Q9HCC6 221 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TREM2Q9NZC2 230 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 OR5AC2Q9NZP5 309 aa11.95□□□□□ -0.5
CDK5RAP1-202ENST00000346416 A6NLC8 198 aa11.94□□□□□ -0.5
CDK5RAP1-202ENST00000346416 I3L521 148 aa11.94□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PRRG2O14669 202 aa11.94□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SHOXO15266 292 aa11.94□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MDH2P40926 338 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP1-202ENST00000346416 KCNJ3P48549 501 aa11.94□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PRAMEF6Q5VXH4 476 aa11.94□□□□□ -0.5
CDK5RAP1-202ENST00000346416 RGS7BPQ6MZT1 257 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP1-202ENST00000346416 LIAT1Q6ZQX7 453 aa11.94□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PLPPR1Q8TBJ4 325 aa11.94□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MSRB2Q9Y3D2 182 aa11.94□□□□□ -0.5
CDK5RAP1-202ENST00000346416 IGKV1D-13A0A0B4J2D9 117 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 A8MXE2 369 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 WNT9BO14905 357 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MPPED1O15442 326 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PHF1O43189 567 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PET100P0DJ07 73 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 IGKV1-13P0DP09 117 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 LYL1P12980 280 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 LUMP51884 338 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 S100A10P60903 97 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 UBA52P62987 128 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 HLA-DRB3P79483 266 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 FAM27E3Q08E93 113 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MSMPQ1L6U9 139 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 C1QTNF12Q5T7M4 302 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ZNF497Q6ZNH5 498 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 LRTM2Q8N967 370 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ZNF565Q8N9K5 539 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SPERTQ8NA61 448 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 OR4A4PQ8NGN8 299 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MSI2Q96DH6 328 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TP53RKQ96S44 253 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ZNF471Q9BX82 626 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TLNRD1Q9H1K6 362 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 UFSP2Q9NUQ7 469 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 OR14J1Q9UGF5 321 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PCDHB10Q9UN67 800 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TRAV39A0A0B4J263 110 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 H7C1Q1 480 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CRYZL1O95825 349 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 HAND1O96004 215 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CRYAAP02489 173 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 CEBPDP49716 269 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 HOXA4Q00056 320 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 AANATQ16613 207 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SHEQ5VZ18 495 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 FIP1L1Q6UN15 594 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 WDR82Q6UXN9 313 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ZNF818PQ6ZRF7 136 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 LYZL2Q7Z4W2 148 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 FOXRED2Q8IWF2 684 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 FAM185AQ8N0U4 392 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 KIRREL1Q96J84 757 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SLC5A7Q9GZV3 580 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 DUSP13Q9UII6 198 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 SPTBN4Q9H254 2564 aa11.93□□□□□ -0.5
CDK5RAP1-202ENST00000346416 IGF2RP11717 2491 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 C3orf85A0A1B0GTC6 90 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 A0A1B0GWJ7 208 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 POM121CA8CG34 1229 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 F5H0A9 414 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 NMBP08949 121 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 LRP11Q86VZ4 500 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 LGI3Q8N145 548 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 GAPTQ8N292 157 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 OR1S1Q8NH92 325 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 OR10J5Q8NHC4 309 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 IL1F10Q8WWZ1 152 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 C18orf12Q96KH6 178 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 ARPC5LQ9BPX5 153 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MED9Q9NWA0 146 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TUBD1Q9UJT1 453 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 TRAPPC2LQ9UL33 140 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PCNX1Q96RV3 2341 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 A0A0G2JNJ9 132 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 MSGN1A6NI15 193 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 C1QTNF9BB2RNN3 333 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 GPR31O00270 319 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 PSPNO60542 156 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 C3orf36Q3SXR2 165 aa11.92□□□□□ -0.5
CDK5RAP1-202ENST00000346416 KIAA2026Q5HYC2 2103 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms