RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 CD34P28906 385 aa12.98□□□□□ -0.33
ATG4B-201ENST00000344376 CEACAM3P40198 252 aa12.98□□□□□ -0.33
ATG4B-201ENST00000344376 RPL5P46777 297 aaKnown RBP12.98□□□□□ -0.33
ATG4B-201ENST00000344376 PAX5Q02548 391 aa12.98□□□□□ -0.33
ATG4B-201ENST00000344376 MS4A15Q8N5U1 240 aa12.98□□□□□ -0.33
ATG4B-201ENST00000344376 NKAIN3Q8N8D7 197 aa12.98□□□□□ -0.33
ATG4B-201ENST00000344376 SUMF2Q8NBJ7 301 aa12.98□□□□□ -0.33
ATG4B-201ENST00000344376 OR4P4Q8NGL7 312 aa12.98□□□□□ -0.33
ATG4B-201ENST00000344376 MUL1Q969V5 352 aa12.98□□□□□ -0.33
ATG4B-201ENST00000344376 DPM3Q9P2X0 92 aa12.98□□□□□ -0.33
ATG4B-201ENST00000344376 FAM172BPA6NC97 362 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 LEUTXA8MZ59 168 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 GEMIN2O14893 280 aaKnown RBP12.97□□□□□ -0.33
ATG4B-201ENST00000344376 CHST1O43916 411 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 NFYBP25208 207 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 KIR2DS4P43632 304 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 RAB13P51153 203 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 PRRX1P54821 245 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 LDLRAD2Q5SZI1 272 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 ATAD3CQ5T2N8 411 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 RSBN1Q5VWQ0 802 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-201ENST00000344376 AWAT2Q6E213 333 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 GLIPR1L1Q6UWM5 242 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 TREML4Q6UXN2 200 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 OR13A1Q8NGR1 328 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 NEK7Q8TDX7 302 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 SPACA1Q9HBV2 294 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 CALYQ9NYX4 217 aa12.97□□□□□ -0.33
ATG4B-201ENST00000344376 A6NDX4 124 aa12.96□□□□□ -0.33
ATG4B-201ENST00000344376 IL1AP01583 271 aa12.96□□□□□ -0.33
ATG4B-201ENST00000344376 CALRP27797 417 aaKnown RBP12.96□□□□□ -0.33
ATG4B-201ENST00000344376 SPHARQ15513 63 aa12.96□□□□□ -0.33
ATG4B-201ENST00000344376 MED22Q15528 200 aa12.96□□□□□ -0.33
ATG4B-201ENST00000344376 C17orf58Q2M2W7 97 aa12.96□□□□□ -0.33
ATG4B-201ENST00000344376 BAIAP2L2Q6UXY1 529 aa12.96□□□□□ -0.33
ATG4B-201ENST00000344376 PLPPR1Q8TBJ4 325 aa12.96□□□□□ -0.33
ATG4B-201ENST00000344376 MRPS24Q96EL2 167 aaKnown RBP12.96□□□□□ -0.33
ATG4B-201ENST00000344376 ZNF286AQ9HBT8 521 aa12.96□□□□□ -0.33
ATG4B-201ENST00000344376 A0A087X0M5 115 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 A0A1B0GX30 115 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 TMEM30CPA0ZSE6 113 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 MEGF11A6BM72 1044 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 TRIM64CA6NLI5 447 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 IGLV1-47P01700 117 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 BRS3P32247 399 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 GDNFP39905 211 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 KRTAP10-3P60369 221 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 HLA-DRB5Q30154 266 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 TMEM219Q86XT9 240 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 OR9G1Q8NH87 305 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 MRGPRDQ8TDS7 321 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 KIRREL1Q96J84 757 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 TSC22D3Q99576 134 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 UQCC2Q9BRT2 126 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 TMED9Q9BVK6 235 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 IDI2-AS1Q9NZ38 188 aa12.95□□□□□ -0.34
ATG4B-201ENST00000344376 AMMECR1Q9Y4X0 333 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-201ENST00000344376 PIN1P1O15428 100 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 SLC35A2P78381 396 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 RBM39Q14498 530 aaKnown RBP12.94□□□□□ -0.34
ATG4B-201ENST00000344376 ACSM3Q53FZ2 586 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 CCDC144NLQ6NUI1 221 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 Q6ZTK2 550 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 TSPAN14Q8NG11 270 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 OR10A7Q8NGE5 316 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 CAPSLQ8WWF8 208 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 UFD1Q92890 307 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 OR5M11Q96RB7 305 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 LINC00574Q9H8X3 128 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 LSM2Q9Y333 95 aaKnown RBP12.94□□□□□ -0.34
ATG4B-201ENST00000344376 SIGLEC9Q9Y336 463 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 MGAM2Q2M2H8 2515 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 A0A1W2PP11 408 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 RGS10O43665 173 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 TFAP2AP05549 437 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 CGB3P0DN86 165 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 CGB7P0DN87 165 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 MNDAP41218 407 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 EFNB2P52799 333 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 GPR50Q13585 617 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 ARSJQ5FYB0 599 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-201ENST00000344376 CCBE1Q6UXH8 406 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-201ENST00000344376 AKR1E2Q96JD6 320 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 PRSS22Q9GZN4 317 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 MMP28Q9H239 520 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 ZNF581Q9P0T4 197 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 GHRLQ9UBU3 117 aa12.94□□□□□ -0.34
ATG4B-201ENST00000344376 A0A087WXM4 84 aa12.93□□□□□ -0.34
ATG4B-201ENST00000344376 OOSP1A8MZH6 123 aa12.93□□□□□ -0.34
ATG4B-201ENST00000344376 MCRIP1C9JLW8 97 aa12.93□□□□□ -0.34
ATG4B-201ENST00000344376 BUB1B-PAK6H3BSN5 160 aa12.93□□□□□ -0.34
ATG4B-201ENST00000344376 CRTAPO75718 401 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-201ENST00000344376 GZMHP20718 246 aa12.93□□□□□ -0.34
ATG4B-201ENST00000344376 IRF3Q14653 427 aa12.93□□□□□ -0.34
ATG4B-201ENST00000344376 HERPUD1Q15011 391 aa12.93□□□□□ -0.34
ATG4B-201ENST00000344376 LTC4SQ16873 150 aa12.93□□□□□ -0.34
ATG4B-201ENST00000344376 RBM48Q5RL73 367 aaKnown RBP12.93□□□□□ -0.34
ATG4B-201ENST00000344376 TPTE2P1Q5T6R2 138 aa12.93□□□□□ -0.34
ATG4B-201ENST00000344376 C16orf82Q7Z2V1 217 aa12.93□□□□□ -0.34
ATG4B-201ENST00000344376 KLHDC1Q8N7A1 406 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms