RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 TAS2R4Q9NYW5 299 aa12.63□□□□□ -0.39
MUC1-201ENST00000337604 IDI2-AS1Q9NZ38 188 aa12.63□□□□□ -0.39
MUC1-201ENST00000337604 DHDHQ9UQ10 334 aa12.63□□□□□ -0.39
MUC1-201ENST00000337604 AMMECR1Q9Y4X0 333 aaPredicted RBP12.63□□□□□ -0.39
MUC1-201ENST00000337604 GMPPBQ9Y5P6 360 aa12.63□□□□□ -0.39
MUC1-201ENST00000337604 DUS4LO95620 317 aaKnown RBP12.62□□□□□ -0.39
MUC1-201ENST00000337604 GTF2A1P52655 376 aaPredicted RBP12.62□□□□□ -0.39
MUC1-201ENST00000337604 RPL23AP62750 156 aaKnown RBP12.62□□□□□ -0.39
MUC1-201ENST00000337604 XAF1Q6GPH4 301 aa12.62□□□□□ -0.39
MUC1-201ENST00000337604 OR2W3Q7Z3T1 314 aa12.62□□□□□ -0.39
MUC1-201ENST00000337604 OR52I1Q8NGK6 324 aa12.62□□□□□ -0.39
MUC1-201ENST00000337604 RHOXF1Q8NHV9 184 aa12.62□□□□□ -0.39
MUC1-201ENST00000337604 APH1BQ8WW43 257 aa12.62□□□□□ -0.39
MUC1-201ENST00000337604 MRPL48Q96GC5 212 aaKnown RBP12.62□□□□□ -0.39
MUC1-201ENST00000337604 A0A1W2PPE3 182 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 SNTNA6NMZ2 147 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 FADS2O95864 444 aaKnown RBP12.61□□□□□ -0.39
MUC1-201ENST00000337604 CCDC159P0C7I6 412 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 TMEM11P17152 192 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 RAB3AP20336 220 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 SOX2P48431 317 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 THBS3P49746 956 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 MADCAM1Q13477 382 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 ASCL4Q6XD76 172 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 ZNF565Q8N9K5 539 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 JAM3Q9BX67 310 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 LINC00527Q9UJ94 153 aa12.61□□□□□ -0.39
MUC1-201ENST00000337604 FGF16O43320 207 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 CDRT1O95170 752 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 CLIC3O95833 236 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 IGKV1D-33P01593 117 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 IGKV1-33P01594 117 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 LIMS3P0CW19 117 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 LIMS4P0CW20 117 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 C21orf33P30042 268 aaPredicted RBP12.6□□□□□ -0.39
MUC1-201ENST00000337604 RAB40BQ12829 278 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 MRPL28Q13084 256 aaKnown RBP12.6□□□□□ -0.39
MUC1-201ENST00000337604 HES1Q14469 280 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 HNF4GQ14541 408 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 VAX1Q5SQQ9 334 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 FAM53AQ6NSI3 398 aaPredicted RBP12.6□□□□□ -0.39
MUC1-201ENST00000337604 C8orf86Q6ZUL3 223 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 SATL1Q86VE3 508 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 OR8H3Q8N146 312 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 SUMF2Q8NBJ7 301 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 GPER1Q99527 375 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 SLC29A1Q99808 456 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 BARHL1Q9BZE3 327 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 FAM192AQ9GZU8 254 aa12.6□□□□□ -0.39
MUC1-201ENST00000337604 MRPS18AQ9NVS2 196 aaKnown RBP12.6□□□□□ -0.39
MUC1-201ENST00000337604 HSD17B6O14756 317 aa12.59□□□□□ -0.39
MUC1-201ENST00000337604 IGHG2P01859 326 aa12.59□□□□□ -0.39
MUC1-201ENST00000337604 KCNJ3P48549 501 aa12.59□□□□□ -0.39
MUC1-201ENST00000337604 RAB7AP51149 207 aa12.59□□□□□ -0.39
MUC1-201ENST00000337604 GBX2P52951 348 aaPredicted RBP12.59□□□□□ -0.39
MUC1-201ENST00000337604 RBM11P57052 281 aaKnown RBP12.59□□□□□ -0.39
MUC1-201ENST00000337604 RSU1Q15404 277 aa12.59□□□□□ -0.39
MUC1-201ENST00000337604 ZFP1Q6P2D0 407 aa12.59□□□□□ -0.39
MUC1-201ENST00000337604 HAVCR2Q8TDQ0 301 aa12.59□□□□□ -0.39
MUC1-201ENST00000337604 CHPT1Q8WUD6 406 aa12.59□□□□□ -0.39
MUC1-201ENST00000337604 ORAI1Q96D31 301 aa12.59□□□□□ -0.39
MUC1-201ENST00000337604 P2RX4Q99571 388 aa12.59□□□□□ -0.39
MUC1-201ENST00000337604 DPCDQ9BVM2 203 aaPredicted RBP12.59□□□□□ -0.39
MUC1-201ENST00000337604 IFT22Q9H7X7 185 aa12.59□□□□□ -0.39
MUC1-201ENST00000337604 IGHV3-72A0A0B4J1Y9 119 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 LINC01548A6NM66 108 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 SERPINE3A8MV23 424 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 C15orf65H3BRN8 121 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 MPZL2O60487 215 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 HTR3BO95264 441 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 RPSAP08865 295 aaKnown RBP12.58□□□□□ -0.4
MUC1-201ENST00000337604 REG1BP48304 166 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 ZNF816Q0VGE8 651 aaPredicted RBP12.58□□□□□ -0.4
MUC1-201ENST00000337604 EBI3Q14213 229 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 SMN1Q16637 294 aaKnown RBP12.58□□□□□ -0.4
MUC1-201ENST00000337604 NHLRC3Q5JS37 347 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 Q8N6K4 173 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 OR10A7Q8NGE5 316 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 OR51D1Q8NGF3 324 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 OR10X1Q8NGY0 326 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 UBALD1Q8TB05 177 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 TMEM106AQ96A25 262 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 CPNE2Q96FN4 548 aaPredicted RBP12.58□□□□□ -0.4
MUC1-201ENST00000337604 MYCBPQ99417 103 aaPredicted RBP12.58□□□□□ -0.4
MUC1-201ENST00000337604 IL36GQ9NZH8 169 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 ST3GAL6Q9Y274 331 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 SIRT4Q9Y6E7 314 aaPredicted RBP12.58□□□□□ -0.4
MUC1-201ENST00000337604 TENM3Q9P273 2699 aa12.58□□□□□ -0.4
MUC1-201ENST00000337604 IGHV1-3A0A0C4DH29 117 aa12.57□□□□□ -0.4
MUC1-201ENST00000337604 A0A1W2PP11 408 aa12.57□□□□□ -0.4
MUC1-201ENST00000337604 GEMIN2O14893 280 aaKnown RBP12.57□□□□□ -0.4
MUC1-201ENST00000337604 MAGEB3O15480 346 aa12.57□□□□□ -0.4
MUC1-201ENST00000337604 WBP4O75554 376 aaKnown RBP12.57□□□□□ -0.4
MUC1-201ENST00000337604 OR7C1O76099 320 aaPredicted RBP12.57□□□□□ -0.4
MUC1-201ENST00000337604 DEFB121Q5J5C9 76 aa12.57□□□□□ -0.4
MUC1-201ENST00000337604 DDI2Q5TDH0 399 aa12.57□□□□□ -0.4
MUC1-201ENST00000337604 OR2G6Q5TZ20 316 aa12.57□□□□□ -0.4
MUC1-201ENST00000337604 SLC16A12Q6ZSM3 486 aa12.57□□□□□ -0.4
MUC1-201ENST00000337604 SLC35E3Q7Z769 313 aa12.57□□□□□ -0.4
MUC1-201ENST00000337604 IZUMO1Q8IYV9 350 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms