RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 EFNB2P52799 333 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 SUCLG1P53597 346 aaKnown RBP13.03□□□□□ -0.32
C9orf47-201ENST00000334490 RBM11P57052 281 aaKnown RBP13.03□□□□□ -0.32
C9orf47-201ENST00000334490 TMEM267Q0VDI3 215 aaPredicted RBP13.03□□□□□ -0.32
C9orf47-201ENST00000334490 RPUSD3Q6P087 351 aaKnown RBP13.03□□□□□ -0.32
C9orf47-201ENST00000334490 GAPTQ8N292 157 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 R3HDM4Q96D70 268 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 TUBG2Q9NRH3 451 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 A0A0G2JMM0 328 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 A0A1W2PPB8 328 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 A0A1W2PRS3 328 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 KIR3DP1A8MWS1 328 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 GOSR1O95249 250 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 RAG2P55895 527 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 RAB32Q13637 225 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 KDF1Q8NAX2 398 aaPredicted RBP13.03□□□□□ -0.32
C9orf47-201ENST00000334490 NFAM1Q8NET5 270 aaPredicted RBP13.03□□□□□ -0.32
C9orf47-201ENST00000334490 RBPMSQ93062 196 aaKnown RBP13.03□□□□□ -0.32
C9orf47-201ENST00000334490 RPUSD4Q96CM3 377 aaKnown RBP13.03□□□□□ -0.32
C9orf47-201ENST00000334490 CHD5Q8TDI0 1954 aa13.03□□□□□ -0.32
C9orf47-201ENST00000334490 MTCL1Q9Y4B5 1905 aaKnown RBP13.03□□□□□ -0.32
C9orf47-201ENST00000334490 RPL36A-HNRNPH2H7BZ11 118 aa13.02□□□□□ -0.32
C9orf47-201ENST00000334490 LY86O95711 162 aa13.02□□□□□ -0.32
C9orf47-201ENST00000334490 PDGFAP04085 211 aa13.02□□□□□ -0.32
C9orf47-201ENST00000334490 Q6ZT83 130 aa13.02□□□□□ -0.32
C9orf47-201ENST00000334490 C20orf24Q9BUV8 137 aa13.02□□□□□ -0.32
C9orf47-201ENST00000334490 ZMIZ1Q9ULJ6 1067 aa13.02□□□□□ -0.32
C9orf47-201ENST00000334490 MED12Q93074 2177 aa13.02□□□□□ -0.32
C9orf47-201ENST00000334490 ZNF705FA8MVS1 300 aaPredicted RBP13.02□□□□□ -0.32
C9orf47-201ENST00000334490 ADAM10O14672 748 aa13.02□□□□□ -0.32
C9orf47-201ENST00000334490 ZNF705DP0CH99 300 aaPredicted RBP13.02□□□□□ -0.32
C9orf47-201ENST00000334490 ZNF705BP0CI00 300 aaPredicted RBP13.02□□□□□ -0.32
C9orf47-201ENST00000334490 ETFRF1Q6IPR1 90 aa13.02□□□□□ -0.32
C9orf47-201ENST00000334490 ESPL1Q14674 2120 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 NPIPB9F8W1W9 429 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 SLC38A11Q08AI6 406 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 SURF2Q15527 256 aaPredicted RBP13.02□□□□□ -0.33
C9orf47-201ENST00000334490 TMEM65Q6PI78 240 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 LINC01560Q8TB33 94 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 DPF1Q92782 380 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 AP1S3Q96PC3 154 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF727A8MUV8 499 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 MGST3O14880 152 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 LINC00596Q86U02 117 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 OR8G5Q8NG78 346 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 BTF3L4Q96K17 158 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 RASL11BQ9BPW5 248 aa13.02□□□□□ -0.33
C9orf47-201ENST00000334490 HDHD3Q9BSH5 251 aaPredicted RBP13.02□□□□□ -0.33
C9orf47-201ENST00000334490 SSX4O60224 188 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 ZIC3O60481 467 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 ADAP1O75689 374 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 CLDN14O95500 239 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 METTL15P1P0C7V9 234 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 KLF14Q8TD94 323 aaPredicted RBP13.01□□□□□ -0.33
C9orf47-201ENST00000334490 A0A1W2PPE3 182 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 SNAI3Q3KNW1 292 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 H3F3CQ6NXT2 135 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 MIXL1Q9H2W2 232 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 OR2W1Q9Y3N9 320 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 TMEM229AB2RXF0 380 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 HSBP1L1C9JCN9 74 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 CTDSPLO15194 276 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 FAHD2BQ6P2I3 314 aaPredicted RBP13.01□□□□□ -0.33
C9orf47-201ENST00000334490 VWA1Q6PCB0 445 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 DBX2Q6ZNG2 339 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 HIST2H3AQ71DI3 136 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 FAHD2AQ96GK7 314 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 TMUB1Q9BVT8 246 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 WNT5BQ9H1J7 359 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 LPAR3Q9UBY5 353 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 ZDHHC8Q9ULC8 765 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 LOC102723996A0A087X1L8 192 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 A0A1W2PP11 408 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 FAM24AA6NFZ4 105 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 BCL2L11O43521 198 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 PPP1CCP36873 323 aaKnown RBP13.01□□□□□ -0.33
C9orf47-201ENST00000334490 LGALS7P47929 136 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 FAM27E3Q08E93 113 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 MITD1Q8WV92 249 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 PIPOXQ9P0Z9 390 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 PCDHGA9Q9Y5G4 932 aaKnown RBP13.01□□□□□ -0.33
C9orf47-201ENST00000334490 KPTNQ9Y664 436 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 URGCP-MRPS24S4R325 110 aa13.01□□□□□ -0.33
C9orf47-201ENST00000334490 TXNL1O43396 289 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 OR4A4PQ8NGN8 299 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 OR5C1Q8NGR4 320 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 TVP23CQ96ET8 276 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 OR1A1Q9P1Q5 309 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 GSTZ1O43708 216 aaPredicted RBP13□□□□□ -0.33
C9orf47-201ENST00000334490 BMI1P35226 326 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 BPIFCQ8NFQ6 507 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 RXFP4Q8TDU9 374 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 FLYWCH2Q96CP2 140 aaKnown RBP13□□□□□ -0.33
C9orf47-201ENST00000334490 HARBI1Q96MB7 349 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 HSD17B10Q99714 261 aaKnown RBP13□□□□□ -0.33
C9orf47-201ENST00000334490 TMEM147Q9BVK8 224 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 GP6Q9HCN6 339 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 SMCO4Q9NRQ5 59 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 RNF24Q9Y225 148 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms