RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CCDC71LQ8N9Z2 235 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 SCARB1Q8WTV0 552 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 GLYATL2Q8WU03 294 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 SECTM1Q8WVN6 248 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 RRNAD1Q96FB5 475 aaKnown RBP15.53■□□□□ 0.08
CCDC43-201ENST00000315286 SUCNR1Q9BXA5 334 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 OR5AC2Q9NZP5 309 aa15.53■□□□□ 0.08
CCDC43-201ENST00000315286 CHD3Q12873 2000 aaKnown RBP15.53■□□□□ 0.08
CCDC43-201ENST00000315286 TRAV39A0A0B4J263 110 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 IGKV1D-13A0A0B4J2D9 117 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 A6NLC8 198 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 BCL2L11O43521 198 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 IGKV1-13P0DP09 117 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 CEBPDP49716 269 aaPredicted RBP15.52■□□□□ 0.08
CCDC43-201ENST00000315286 SPIN3Q5JUX0 258 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 PRSS54Q6PEW0 395 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 C22orf34Q6ZV56 151 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 LRP11Q86VZ4 500 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 MSI2Q96DH6 328 aaKnown RBP15.52■□□□□ 0.08
CCDC43-201ENST00000315286 TLNRD1Q9H1K6 362 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 UFSP2Q9NUQ7 469 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 TREM2Q9NZC2 230 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 OR14J1Q9UGF5 321 aa15.52■□□□□ 0.08
CCDC43-201ENST00000315286 KIAA2026Q5HYC2 2103 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 MPPED1O15442 326 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 IFNA21P01568 189 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 RLN2P04090 185 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 LYL1P12980 280 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 MDH2P40926 338 aaKnown RBP15.52■□□□□ 0.07
CCDC43-201ENST00000315286 HLA-DRB3P79483 266 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 WDR82Q6UXN9 313 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 ZNF497Q6ZNH5 498 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 LIAT1Q6ZQX7 453 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 SPERTQ8NA61 448 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 OR4A4PQ8NGN8 299 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 ST8SIA2Q92186 375 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 DUSP13Q9UII6 198 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 AUP1Q9Y679 476 aa15.52■□□□□ 0.07
CCDC43-201ENST00000315286 PCNX1Q96RV3 2341 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 A0A0G2JNJ9 132 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 A0A1B0GWJ7 208 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 PHF1O43189 567 aaPredicted RBP15.51■□□□□ 0.07
CCDC43-201ENST00000315286 HAND1O96004 215 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 CRYAAP02489 173 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 SHEQ5VZ18 495 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 GFRALQ6UXV0 394 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 LYZL2Q7Z4W2 148 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 LRTM2Q8N967 370 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 ZNF565Q8N9K5 539 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 KIRREL1Q96J84 757 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 TP53RKQ96S44 253 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 SLC5A7Q9GZV3 580 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 Q9UFV3 132 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 PCDHB10Q9UN67 800 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 MEMO1Q9Y316 297 aa15.51■□□□□ 0.07
CCDC43-201ENST00000315286 TUBAL3A6NHL2 446 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 C1QTNF9BB2RNN3 333 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 C3orf36Q3SXR2 165 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 ESCO2Q56NI9 601 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 ZNF818PQ6ZRF7 136 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 LDLRAD3Q86YD5 345 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 SNRNP40Q96DI7 357 aaKnown RBP15.5■□□□□ 0.07
CCDC43-201ENST00000315286 C18orf12Q96KH6 178 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 TLN1Q9Y490 2541 aaKnown RBP15.5■□□□□ 0.07
CCDC43-201ENST00000315286 C3orf85A0A1B0GTC6 90 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 LUMP51884 338 aaPredicted RBP15.5■□□□□ 0.07
CCDC43-201ENST00000315286 S100A10P60903 97 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 UBA52P62987 128 aaKnown RBP15.5■□□□□ 0.07
CCDC43-201ENST00000315286 PRR30Q53SZ7 412 aaPredicted RBP15.5■□□□□ 0.07
CCDC43-201ENST00000315286 FIP1L1Q6UN15 594 aaKnown RBP15.5■□□□□ 0.07
CCDC43-201ENST00000315286 FAM185AQ8N0U4 392 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 GAPTQ8N292 157 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 OR1S1Q8NH92 325 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 OR10J5Q8NHC4 309 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 LHFPL5Q8TAF8 219 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 GPHA2Q96T91 129 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 ZNF471Q9BX82 626 aaPredicted RBP15.5■□□□□ 0.07
CCDC43-201ENST00000315286 CCL28Q9NRJ3 127 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 KIF25Q9UIL4 384 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 TRAPPC2LQ9UL33 140 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 ICE1Q9Y2F5 2266 aa15.5■□□□□ 0.07
CCDC43-201ENST00000315286 MSGN1A6NI15 193 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 POM121CA8CG34 1229 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 H7C1Q1 480 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 PSPNO60542 156 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 FAM87AP0C7U9 286 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 ZNF250P15622 560 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 NKX6-1P78426 367 aaPredicted RBP15.49■□□□□ 0.07
CCDC43-201ENST00000315286 ACP7Q6ZNF0 438 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 TBC1D26Q86UD7 250 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 FOXRED2Q8IWF2 684 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 LGI3Q8N145 548 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 OR2Z1Q8NG97 314 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 IL1F10Q8WWZ1 152 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 CABLES2Q9BTV7 478 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 SH3BGRL2Q9UJC5 107 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 TUBD1Q9UJT1 453 aa15.49■□□□□ 0.07
CCDC43-201ENST00000315286 GPR31O00270 319 aa15.48■□□□□ 0.07
CCDC43-201ENST00000315286 HSD17B6O14756 317 aa15.48■□□□□ 0.07
CCDC43-201ENST00000315286 NMBP08949 121 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms