RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 ZNF561Q8N587 486 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 ASCC1Q8N9N2 400 aaKnown RBP11.82□□□□□ -0.52
EIF3F-201ENST00000309828 TMEM185AQ8NFB2 350 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 OR5D13Q8NGL4 314 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 MARCH1Q8TCQ1 289 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 DACT3Q96B18 629 aaPredicted RBP11.82□□□□□ -0.52
EIF3F-201ENST00000309828 CABLES2Q9BTV7 478 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 BEX2Q9BXY8 128 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 SHARPINQ9H0F6 387 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 FAM234AQ9H0X4 552 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 BEX1Q9HBH7 125 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 TMEM106BQ9NUM4 274 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 KCNIP1Q9NZI2 227 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 TRAPPC2LQ9UL33 140 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 PCDHB10Q9UN67 800 aa11.82□□□□□ -0.52
EIF3F-201ENST00000309828 HELZ2Q9BYK8 2649 aaKnown RBP11.82□□□□□ -0.52
EIF3F-201ENST00000309828 IGHV3OR15-7A0A075B7D8 119 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 OR5H14A6NHG9 310 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 NPIPB11E5RHQ5 1161 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 K7N7A8 449 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 FSTL3O95633 263 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 TK1P04183 234 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 OR4E1P0C645 316 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 GABRA2P47869 451 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 HMGN3Q15651 99 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 C6orf183Q5T699 404 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 C11orf71Q6IPW1 123 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 TMED4Q7Z7H5 227 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 DTX2Q86UW9 622 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 OR5T2Q8NGG2 359 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 ZFAND1Q8TCF1 268 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 COQ2Q96H96 371 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 RAB1BQ9H0U4 201 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 ZNF665Q9H7R5 613 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
EIF3F-201ENST00000309828 CHD3Q12873 2000 aaKnown RBP11.81□□□□□ -0.52
EIF3F-201ENST00000309828 SMG1Q96Q15 3661 aaKnown RBP11.8□□□□□ -0.52
EIF3F-201ENST00000309828 PPIAL4EA0A075B759 164 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 IGHV1-69-2A0A0G2JMI3 117 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 NKX6-3A6NJ46 265 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 A6NNC1 897 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 PPIAL4DF5H284 164 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 SSNA1O43805 119 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 HPXP02790 462 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 CTSDP07339 412 aaPredicted RBP11.8□□□□□ -0.52
EIF3F-201ENST00000309828 HNRNPCP07910 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
EIF3F-201ENST00000309828 SCTP09683 121 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 PPIAL4FP0DN26 164 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 PGAM2P15259 253 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 RCC1P18754 421 aaPredicted RBP11.8□□□□□ -0.52
EIF3F-201ENST00000309828 FCGR2CP31995 323 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 NPY4RP50391 375 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 HERV-K104P61576 105 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 HOXA4Q00056 320 aaPredicted RBP11.8□□□□□ -0.52
EIF3F-201ENST00000309828 KCNJ8Q15842 424 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 C4orf46Q504U0 113 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 KRBOX4Q5JUW0 171 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 MEX3BQ6ZN04 569 aaKnown RBP11.8□□□□□ -0.52
EIF3F-201ENST00000309828 ZNF788Q6ZQV5 615 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 ZNF431Q8TF32 576 aaPredicted RBP11.8□□□□□ -0.52
EIF3F-201ENST00000309828 NEU4Q8WWR8 484 aaPredicted RBP11.8□□□□□ -0.52
EIF3F-201ENST00000309828 MOB3AQ96BX8 217 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 SEC22CQ9BRL7 303 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 ING3Q9NXR8 418 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 SLC23A1Q9UHI7 598 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 OPN4Q9UHM6 478 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 KIF25Q9UIL4 384 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 ZNF221Q9UK13 617 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 C14orf166Q9Y224 244 aaKnown RBP11.8□□□□□ -0.52
EIF3F-201ENST00000309828 PPIAL4AQ9Y536 164 aa11.8□□□□□ -0.52
EIF3F-201ENST00000309828 MEIKINA0A087WXM9 373 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 TRBV6-7A0A0A0MS04 114 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 DANCRP0C864 163 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 ZNF728P0DKX0 622 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 SULT1A3P0DMM9 295 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 SULT1A4P0DMN0 295 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 ERP29P30040 261 aaKnown RBP11.79□□□□□ -0.52
EIF3F-201ENST00000309828 MRPS11P82912 194 aaKnown RBP11.79□□□□□ -0.52
EIF3F-201ENST00000309828 DHODHQ02127 395 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 AESQ08117 197 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 HFEQ30201 348 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 TMEM128Q5BJH2 165 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 IGSF11Q5DX21 431 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 LPCAT3Q6P1A2 487 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 SPICQ8N5J4 248 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 CCL17Q92583 94 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 ZNF486Q96H40 463 aaPredicted RBP11.79□□□□□ -0.52
EIF3F-201ENST00000309828 LURAP1Q96LR2 239 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 GAFA1Q96PS6 74 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 VRK1Q99986 396 aaPredicted RBP11.79□□□□□ -0.52
EIF3F-201ENST00000309828 SPOCK3Q9BQ16 436 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 TRAF4Q9BUZ4 470 aaPredicted RBP11.79□□□□□ -0.52
EIF3F-201ENST00000309828 FXYD6Q9H0Q3 95 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 C5orf66Q9H5L9 145 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 DLL4Q9NR61 685 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 ZNF69Q9UC07 566 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 MAB21L2Q9Y586 359 aa11.79□□□□□ -0.52
EIF3F-201ENST00000309828 FAM172BPA6NC97 362 aa11.78□□□□□ -0.52
EIF3F-201ENST00000309828 J3QKU1 62 aa11.78□□□□□ -0.52
EIF3F-201ENST00000309828 SIGLEC5O15389 551 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms