RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 HARBI1Q96MB7 349 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 ELL3Q9HB65 397 aaPredicted RBP9.17□□□□□ -0.94
CASP3-201ENST00000308394 MCUBQ9NWR8 336 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 ING4Q9UNL4 249 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 SHANK1Q9Y566 2161 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 SMG1Q96Q15 3661 aaKnown RBP9.17□□□□□ -0.94
CASP3-201ENST00000308394 ANKRD30BLA7E2S9 258 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 HS3ST1O14792 307 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 PF4P02776 101 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 SPP1P10451 314 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 CCKARP32238 428 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 RAB2AP61019 212 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 PITPNAQ00169 270 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 NAAAQ02083 359 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 RNASE12Q5GAN4 147 aaKnown RBP9.17□□□□□ -0.94
CASP3-201ENST00000308394 OR8G2PQ6IF36 304 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 UBASH3BQ8TF42 649 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 SSC4DQ8WTU2 575 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 WFIKKN1Q96NZ8 548 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 CRIM1Q9NZV1 1036 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 ZDHHC8Q9ULC8 765 aa9.17□□□□□ -0.94
CASP3-201ENST00000308394 FAM90A27PA6NNH2 459 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 K7EP13 123 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 LILRA1O75019 489 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 CRYAAP02489 173 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 CD5P06127 495 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 CSF3P09919 207 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 TMEM225BP0DP42 221 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 SERPINA2P20848 420 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 S100A11P31949 105 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 FUT6P51993 359 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 SLC22A6Q4U2R8 563 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 LEMD1Q68G75 181 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 ZNF546Q86UE3 836 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 RTN4RL2Q86UN3 420 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 ZDHHC23Q8IYP9 409 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 DMBX1Q8NFW5 382 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 TECTBQ96PL2 329 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 HIST1H2AAQ96QV6 131 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 PCGF1Q9BSM1 259 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 MAB21L2Q9Y586 359 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 URGCP-MRPS24S4R325 110 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 TSTD3H0UI37 97 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 SIGLEC5O15389 551 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 SNAI2O43623 268 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 VSIG8P0DPA2 414 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 CHRNB4P30926 498 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 INPP1P49441 399 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 MMP15P51511 669 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 ATP1B3P54709 279 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 TRIQKQ629K1 86 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 FBXW12Q6X9E4 464 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 C1QL2Q7Z5L3 287 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 WFDC8Q8IUA0 241 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 OR10W1Q8NGF6 305 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 KLF14Q8TD94 323 aaPredicted RBP9.16□□□□□ -0.94
CASP3-201ENST00000308394 SCARB1Q8WTV0 552 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 CCDC107Q8WV48 283 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 ZNF701Q9NV72 531 aaPredicted RBP9.16□□□□□ -0.94
CASP3-201ENST00000308394 RDH8Q9NYR8 311 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 RAB22AQ9UL26 194 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 FZR1Q9UM11 496 aa9.16□□□□□ -0.94
CASP3-201ENST00000308394 MYO7BQ6PIF6 2116 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 COL6A6A6NMZ7 2263 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 IGKV1-27A0A075B6S5 117 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 KDM4BO94953 1096 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 CST4P01036 141 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 CA6P23280 308 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 FABP6P51161 128 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 PSG7Q13046 419 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 MICBQ29980 383 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 CRIP3Q6Q6R5 217 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 BAIAP2L2Q6UXY1 529 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 POC5Q8NA72 575 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 NHLRC2Q8NBF2 726 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 OR10K1Q8NGX5 313 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 ASCL2Q99929 193 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 BANF2Q9H503 90 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 SLC23A1Q9UHI7 598 aa9.15□□□□□ -0.94
CASP3-201ENST00000308394 PRR14LQ5THK1 2151 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 A0A1W2PP11 408 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 FAM74A7A6NL05 159 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 SIVA1O15304 175 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 XRCC3O43542 346 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 ANGPTL7O43827 346 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 MPIG6BO95866 241 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 PTHLHP12272 177 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 MPV17P39210 176 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 GPM6AP51674 278 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 PKIAP61925 76 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 ADORA2A-AS1P86434 159 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 UNC119Q13432 240 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 CEACAM21Q3KPI0 293 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 FAM74A3Q4VXF1 159 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 THAP7Q9BT49 309 aaPredicted RBP9.15□□□□□ -0.95
CASP3-201ENST00000308394 RHOFQ9HBH0 211 aa9.15□□□□□ -0.95
CASP3-201ENST00000308394 TRAV18A0A075B6X5 111 aa9.14□□□□□ -0.95
CASP3-201ENST00000308394 NKX2-6A6NCS4 301 aa9.14□□□□□ -0.95
CASP3-201ENST00000308394 UBBP0CG47 229 aa9.14□□□□□ -0.95
CASP3-201ENST00000308394 RAB6AP20340 208 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms