RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 NGFP01138 241 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 CD200P41217 278 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 OR8G1Q15617 311 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 PHYHD1Q5SRE7 291 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 SKA3Q8IX90 412 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 CADM4Q8NFZ8 388 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 CLDN23Q96B33 292 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 ZNF665Q9H7R5 613 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 VCANP13611 3396 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 MFNGO00587 321 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 ACTL6BO94805 426 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 PSG2P11465 335 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 PRAMEF5Q5TYX0 476 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 PRAMEF6Q5VXH4 476 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 C6orf15Q6UXA7 325 aaPredicted RBP11.55□□□□□ -0.56
CASC4-201ENST00000299957 TMEM230Q96A57 120 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 V9GYS6 101 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 CFAP54Q96N23 3096 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 HEXAP06865 529 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 TAS2R30P59541 319 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 RAC3P60763 192 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 FNDC7Q5VTL7 733 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 NCR3LG1Q68D85 454 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 AP4M1O00189 453 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 RFPL3SP0C7P2 107 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 G0S2P27469 103 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 MAGEA5P43359 124 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 SULT1A2P50226 295 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 RNF212Q495C1 297 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 FDX2Q6P4F2 183 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 SLC25A47Q6Q0C1 308 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 RAB39BQ96DA2 213 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 FAM210BQ96KR6 192 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 STARD10Q9Y365 291 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 THSD7BQ9C0I4 1608 aa11.55□□□□□ -0.56
CASC4-201ENST00000299957 IGKV3D-11A0A0A0MRZ8 115 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 SYNGR1O43759 233 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 TRGC2P03986 189 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 OR3A1P47881 315 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 LSM6P62312 80 aaKnown RBP11.54□□□□□ -0.56
CASC4-201ENST00000299957 CATR1Q13166 79 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 FAM209BQ5JX69 171 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 HES3Q5TGS1 186 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 ASPHD2Q6ICH7 369 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 OR13D1Q8NGV5 346 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 MRGPRDQ8TDS7 321 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 RHOVQ96L33 236 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 TP53RKQ96S44 253 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 A0A1W2PNV4 684 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 MAP1LC3B2A6NCE7 125 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 DEDDO75618 318 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 CER1O95813 267 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 CRYAAP02489 173 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 MGST1P10620 155 aaKnown RBP11.54□□□□□ -0.56
CASC4-201ENST00000299957 NAT2P11245 290 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 IGFBP3P17936 291 aaPredicted RBP11.54□□□□□ -0.56
CASC4-201ENST00000299957 GABRA4P48169 554 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 HOXA1P49639 335 aaPredicted RBP11.54□□□□□ -0.56
CASC4-201ENST00000299957 HTD2P86397 168 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 NSUN5P2Q63ZY6 315 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 TMEM252Q8N6L7 170 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 POC1BQ8TC44 478 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 FAM103A1Q9BTL3 118 aaKnown RBP11.54□□□□□ -0.56
CASC4-201ENST00000299957 EDEM2Q9BV94 578 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 SRXN1Q9BYN0 137 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 MAP1LC3BQ9GZQ8 125 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 ARRDC1-AS1Q9H2J1 176 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 PCNX3Q9H6A9 2034 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 LIFP15018 202 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 CEBPDP49716 269 aaPredicted RBP11.54□□□□□ -0.56
CASC4-201ENST00000299957 CALHM1Q8IU99 346 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 FAM58AQ8N1B3 248 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 OR4A16Q8NH70 328 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 GPR61Q9BZJ8 451 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 TWSG1Q9GZX9 223 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 B3GAT1Q9P2W7 334 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 CLDN16Q9Y5I7 305 aa11.54□□□□□ -0.56
CASC4-201ENST00000299957 A0A1W2PR77 199 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 ZNF320A2RRD8 509 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 H0Y8G0 127 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 CD46P15529 392 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 FGF7P21781 194 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 CSRP2Q16527 193 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 ZNF574Q6ZN55 896 aaPredicted RBP11.53□□□□□ -0.56
CASC4-201ENST00000299957 OR10P1Q8NGE3 313 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 CA5BP1Q8WTZ4 195 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 HIST1H2BAQ96A08 127 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 PTX4Q96A99 478 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 OR2H1Q9GZK4 316 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 TINAGQ9UJW2 476 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 A0A0G2JMM0 328 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 A0A1W2PPB8 328 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 A0A1W2PRS3 328 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 KIR3DP1A8MWS1 328 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 EGR1P18146 543 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 OR1C1Q15619 314 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 BAGE3Q86Y29 109 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 BAGE2Q86Y30 109 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 ZNF573Q86YE8 665 aa11.53□□□□□ -0.56
CASC4-201ENST00000299957 COMMD1Q8N668 190 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms