RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 A0A1W2PP11 408 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 CORO1AP31146 461 aaKnown RBP10.33□□□□□ -0.76
SNIP1-201ENST00000296215 CSN1S1P47710 185 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 MESP2Q0VG99 397 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 MALLQ13021 153 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 OR4C11Q6IEV9 310 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 PGLYRP3Q96LB9 341 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 SAP30LQ9HAJ7 183 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 LIN7CQ9NUP9 197 aaKnown RBP10.33□□□□□ -0.76
SNIP1-201ENST00000296215 LOC107986453A0A1B0GWG9 222 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 ISG15P05161 165 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 SMIM17P0DL12 118 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 SLC25A6P12236 298 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 ODF1Q14990 250 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 RTL8BQ17RB0 113 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 TMEM176BQ3YBM2 270 aaPredicted RBP10.33□□□□□ -0.76
SNIP1-201ENST00000296215 ZBTB34Q8NCN2 500 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 CYTL1Q9NRR1 136 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 PRSS21Q9Y6M0 314 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 PEAK1Q9H792 1746 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 B4GALT2O60909 372 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 SLC35B1P78383 322 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 LHFPL4Q7Z7J7 247 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 OR2M7Q8NG81 312 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 OR5D13Q8NGL4 314 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 VDAC3Q9Y277 283 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 HS3ST2Q9Y278 367 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 LRP12Q9Y561 859 aa10.33□□□□□ -0.76
SNIP1-201ENST00000296215 KLRC4-KLRK1H3BQV0 150 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 CER1O95813 267 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 HLA-DQA1P01909 254 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 CSN3P07498 182 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 GCSAMLQ5JQS6 135 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 OTPQ5XKR4 325 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 CCDC144NLQ6NUI1 221 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 MFSD12Q6NUT3 480 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 ADAMTSL5Q6ZMM2 481 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 PLPPR4Q7Z2D5 763 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 SLC25A43Q8WUT9 341 aaPredicted RBP10.32□□□□□ -0.76
SNIP1-201ENST00000296215 PITX3O75364 302 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 ZNF708P17019 499 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 RPS27P42677 84 aaKnown RBP10.32□□□□□ -0.76
SNIP1-201ENST00000296215 NR0B2Q15466 257 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 VAX1Q5SQQ9 334 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 SAMD5Q5TGI4 173 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 ZNF324BQ6AW86 544 aaPredicted RBP10.32□□□□□ -0.76
SNIP1-201ENST00000296215 TPRG1Q6ZUI0 275 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 KCNS1Q96KK3 526 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 HEYLQ9NQ87 328 aaPredicted RBP10.32□□□□□ -0.76
SNIP1-201ENST00000296215 A0A0G2JK05 382 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 A0A1W2PR80 420 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 FAM231BA6NCW3 169 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 TYMSP04818 313 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 ADMP35318 185 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 ARL4DP49703 201 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 DCAF7P61962 342 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 PLPP4Q5VZY2 271 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 ZNF784Q8NCA9 323 aaPredicted RBP10.32□□□□□ -0.76
SNIP1-201ENST00000296215 TMEM204Q9BSN7 226 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 NAA60Q9H7X0 242 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 CD207Q9UJ71 328 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 PLAGL1Q9UM63 463 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 SNED1Q8TER0 1413 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 SHISA7A6NL88 538 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 METTL12A8MUP2 240 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 MPPED1O15442 326 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 ICAM4Q14773 271 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 RHBDD2Q6NTF9 364 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 CLDND1Q9NY35 253 aa10.32□□□□□ -0.76
SNIP1-201ENST00000296215 F11RQ9Y624 299 aaKnown RBP10.32□□□□□ -0.76
SNIP1-201ENST00000296215 DSPPQ9NZW4 1301 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 ALG1L2C9J202 215 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 CRYAAP02489 173 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 CST5P28325 142 aaPredicted RBP10.31□□□□□ -0.76
SNIP1-201ENST00000296215 SOX8P57073 446 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 AMZ2Q86W34 360 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 OR2Z1Q8NG97 314 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 SPACA5Q96QH8 159 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 GNG3P63215 75 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 SMIM14Q96QK8 99 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 ZNF703Q9H7S9 590 aaPredicted RBP10.31□□□□□ -0.76
SNIP1-201ENST00000296215 KLRF1Q9NZS2 232 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 ST6GALNAC2Q9UJ37 374 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 KLK13Q9UKR3 277 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 FEZF1A0PJY2 475 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.31□□□□□ -0.76
SNIP1-201ENST00000296215 NKX2-8O15522 239 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 CD22P20273 847 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 IL3RAP26951 378 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 CLDN2P57739 230 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 SIGLEC7Q9Y286 467 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 SLC5A6Q9Y289 635 aa10.31□□□□□ -0.76
SNIP1-201ENST00000296215 COL9A2Q14055 689 aaPredicted RBP10.3□□□□□ -0.76
SNIP1-201ENST00000296215 GAGE13Q4V321 117 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 C5orf47Q569G3 176 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 NOXO1Q8NFA2 376 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 OR51H1Q8NH63 302 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 TRBV9A0A0B4J1U6 114 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 LOC102725191A0A1B0GVB3 256 aa10.3□□□□□ -0.76
SNIP1-201ENST00000296215 H0YIZ8 118 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms