RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 K7N7A8 449 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 PPIHO43447 177 aaKnown RBP15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 C1QL1O75973 258 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 HLA-HP01893 362 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 MMP7P09237 267 aaPredicted RBP15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 DEFB109BQ30KR1 87 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 FBXW12Q6X9E4 464 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 LGI3Q8N145 548 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 REEP6Q96HR9 211 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 FAAP24Q9BTP7 215 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 GPR173Q9NS66 373 aa15.74■□□□□ 0.11
PDLIM3-201ENST00000284767 TRGV5A0A0B4J1U4 118 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 TM4SF5O14894 197 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 SOX8P57073 446 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 SOHLH1Q5JUK2 328 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 HSD17B11Q8NBQ5 300 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 SPSB1Q96BD6 273 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 SYT3Q9BQG1 590 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 DLL3Q9NYJ7 618 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 ARID1AO14497 2285 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 OR2C1O95371 312 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 FBP1P09467 338 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 RPS23P62266 143 aaKnown RBP15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 HEPN1Q6WQI6 88 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 SUMF2Q8NBJ7 301 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 OR8G5Q8NG78 346 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 MSI2Q96DH6 328 aaKnown RBP15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 WDYHV1Q96HA8 205 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 LRFN3Q9BTN0 628 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 SLC2A9Q9NRM0 540 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 PRSS50Q9UI38 385 aa15.73■□□□□ 0.11
PDLIM3-201ENST00000284767 OR13C7P0DN81 318 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 CCNOP22674 350 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 MTCP1P56278 107 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 TMEM178AQ8NBL3 297 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 OR52M1Q8NGK5 317 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 FAM213BQ8TBF2 198 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 EDARADDQ8WWZ3 215 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 UNKLQ9H9P5 680 aaKnown RBP15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 TMED3Q9Y3Q3 217 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 TNRC6AQ8NDV7 1962 aaKnown RBP15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 SVILO95425 2214 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 GATCO43716 136 aaKnown RBP15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 PPP1CCP36873 323 aaKnown RBP15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 NHLH2Q02577 135 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 RSU1Q15404 277 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 TMEM182Q6ZP80 229 aaPredicted RBP15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 APH1AQ96BI3 265 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 BCO1Q9HAY6 547 aa15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 RCL1Q9Y2P8 373 aaKnown RBP15.72■□□□□ 0.11
PDLIM3-201ENST00000284767 ZNF587BE7ETH6 402 aa15.71■□□□□ 0.11
PDLIM3-201ENST00000284767 OPRM1P35372 400 aa15.71■□□□□ 0.11
PDLIM3-201ENST00000284767 UCP3P55916 312 aa15.71■□□□□ 0.11
PDLIM3-201ENST00000284767 RAB2AP61019 212 aa15.71■□□□□ 0.11
PDLIM3-201ENST00000284767 GNMTQ14749 295 aa15.71■□□□□ 0.11
PDLIM3-201ENST00000284767 NAXEQ8NCW5 288 aa15.71■□□□□ 0.11
PDLIM3-201ENST00000284767 DMXL2Q8TDJ6 3036 aa15.71■□□□□ 0.11
PDLIM3-201ENST00000284767 WRBO00258 174 aa15.71■□□□□ 0.1
PDLIM3-201ENST00000284767 NBL1P41271 181 aa15.71■□□□□ 0.1
PDLIM3-201ENST00000284767 ZNF92Q03936 586 aa15.71■□□□□ 0.1
PDLIM3-201ENST00000284767 CLN3Q13286 438 aa15.71■□□□□ 0.1
PDLIM3-201ENST00000284767 TAF9Q16594 264 aa15.71■□□□□ 0.1
PDLIM3-201ENST00000284767 MCEMP1Q8IX19 187 aa15.71■□□□□ 0.1
PDLIM3-201ENST00000284767 CCDC71LQ8N9Z2 235 aa15.71■□□□□ 0.1
PDLIM3-201ENST00000284767 TOLLIPQ9H0E2 274 aa15.71■□□□□ 0.1
PDLIM3-201ENST00000284767 ZDHHC11Q9H8X9 412 aa15.71■□□□□ 0.1
PDLIM3-201ENST00000284767 PARPBPQ9NWS1 579 aa15.71■□□□□ 0.1
PDLIM3-201ENST00000284767 MED12LQ86YW9 2145 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 BTBD17A6NE02 478 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 EDN3P14138 238 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 FXYD4P59646 89 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 EWSR1Q01844 656 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 ZNF266Q14584 549 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 KRTAP27-1Q3LI81 207 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 HIKESHIQ53FT3 197 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 PHLDA2Q53GA4 152 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 OR4D5Q8NGN0 318 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 BOD1Q96IK1 185 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 DMRT1Q9Y5R6 373 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 HOXA5P20719 270 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 ZNF100Q8IYN0 542 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 OR5L1Q8NGL2 311 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 MOB3AQ96BX8 217 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 MUCL1Q96DR8 90 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 LINC00470Q9BZP3 86 aa15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 PUS1Q9Y606 427 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDLIM3-201ENST00000284767 CEACAM1P13688 526 aa15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 PCBD1P61457 104 aa15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 GGACTQ9BVM4 153 aa15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 ARHGAP21Q5T5U3 1957 aa15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 FAM230AA0A1W2PPH8 454 aa15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 RBFOX3A6NFN3 312 aa15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 ZNF724A8MTY0 619 aa15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 KIAA0141Q14154 515 aaPredicted RBP15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 CNN3Q15417 329 aaKnown RBP15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 NCMAPQ5T1S8 102 aa15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 SLC22A25Q6T423 547 aa15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 ASCL4Q6XD76 172 aa15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 MARS2Q96GW9 593 aaKnown RBP15.69■□□□□ 0.1
PDLIM3-201ENST00000284767 IGKV1-27A0A075B6S5 117 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms