RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CXCL2P19875 107 aa23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 TESK1Q15569 626 aa23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 C20orf204Q6ZNR8 217 aa23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 SLC16A13Q7RTY0 426 aa23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 PXT1Q8NFP0 134 aa23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 IGFBPL1Q8WX77 278 aa23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 EGLN1Q9GZT9 426 aa23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 FN3KRPQ9HA64 309 aa23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 CBY1Q9Y3M2 126 aa23.14■■□□□ 1.29
SMARCD3-201ENST00000262188 BPNT1O95861 308 aa23.13■■□□□ 1.29
SMARCD3-201ENST00000262188 MPIG6BO95866 241 aa23.13■■□□□ 1.29
SMARCD3-201ENST00000262188 TFF1P04155 84 aa23.13■■□□□ 1.29
SMARCD3-201ENST00000262188 GATA4P43694 442 aa23.13■■□□□ 1.29
SMARCD3-201ENST00000262188 PDCD1Q15116 288 aa23.13■■□□□ 1.29
SMARCD3-201ENST00000262188 PCGF3Q3KNV8 242 aa23.13■■□□□ 1.29
SMARCD3-201ENST00000262188 ASCL4Q6XD76 172 aa23.13■■□□□ 1.29
SMARCD3-201ENST00000262188 LRRC28Q86X40 367 aaPredicted RBP23.13■■□□□ 1.29
SMARCD3-201ENST00000262188 CCL17Q92583 94 aa23.13■■□□□ 1.29
SMARCD3-201ENST00000262188 SLC25A38Q96DW6 304 aa23.13■■□□□ 1.29
SMARCD3-201ENST00000262188 METTL9Q9H1A3 318 aa23.13■■□□□ 1.29
SMARCD3-201ENST00000262188 LDLRAD4O15165 306 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 COL8A2P25067 703 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 DEFA6Q01524 100 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 MKXQ8IYA7 352 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 RAB1BQ9H0U4 201 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 ZFP57Q9NU63 452 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 ABRACLQ9P1F3 81 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 POLQO75417 2590 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 TRAPPC2LH3BP13 241 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 EIF4EP06730 217 aaKnown RBP23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 TNFRSF1AP19438 455 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 PAX6P26367 422 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 GPX4P36969 197 aaPredicted RBP23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 PIGYQ3MUY2 71 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 LBHQ53QV2 105 aaPredicted RBP23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 RTN4RL2Q86UN3 420 aa23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 KCTD12Q96CX2 325 aaKnown RBP23.12■■□□□ 1.29
SMARCD3-201ENST00000262188 C5orf52A6NGY3 159 aa23.11■■□□□ 1.29
SMARCD3-201ENST00000262188 TMEM14DPA8MWL7 114 aa23.11■■□□□ 1.29
SMARCD3-201ENST00000262188 OVOL3O00110 214 aa23.11■■□□□ 1.29
SMARCD3-201ENST00000262188 CYB5AP00167 134 aa23.11■■□□□ 1.29
SMARCD3-201ENST00000262188 PGA5P0DJD9 388 aa23.11■■□□□ 1.29
SMARCD3-201ENST00000262188 DUSP1P28562 367 aa23.11■■□□□ 1.29
SMARCD3-201ENST00000262188 LIN54Q6MZP7 749 aa23.11■■□□□ 1.29
SMARCD3-201ENST00000262188 GCSAMQ8N6F7 178 aa23.11■■□□□ 1.29
SMARCD3-201ENST00000262188 ZSCAN4Q8NAM6 433 aaPredicted RBP23.11■■□□□ 1.29
SMARCD3-201ENST00000262188 NICN1Q9BSH3 213 aa23.11■■□□□ 1.29
SMARCD3-201ENST00000262188 POLDIP2Q9Y2S7 368 aa23.11■■□□□ 1.29
SMARCD3-201ENST00000262188 RGS11O94810 467 aa23.1■■□□□ 1.29
SMARCD3-201ENST00000262188 MGMTP16455 207 aa23.1■■□□□ 1.29
SMARCD3-201ENST00000262188 KCNJ3P48549 501 aa23.1■■□□□ 1.29
SMARCD3-201ENST00000262188 SFRP4Q6FHJ7 346 aaPredicted RBP23.1■■□□□ 1.29
SMARCD3-201ENST00000262188 NRIP2Q9BQI9 281 aa23.1■■□□□ 1.29
SMARCD3-201ENST00000262188 PLEKHA6Q9Y2H5 1048 aa23.1■■□□□ 1.29
SMARCD3-201ENST00000262188 IGHV3OR15-7A0A075B7D8 119 aa23.1■■□□□ 1.29
SMARCD3-201ENST00000262188 IGHV1-69-2A0A0G2JMI3 117 aa23.1■■□□□ 1.29
SMARCD3-201ENST00000262188 H7C417 338 aa23.1■■□□□ 1.29
SMARCD3-201ENST00000262188 CD80P33681 288 aa23.1■■□□□ 1.29
SMARCD3-201ENST00000262188 SELENOIQ9C0D9 397 aa23.1■■□□□ 1.29
SMARCD3-201ENST00000262188 CSTBP04080 98 aaKnown RBP23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 ELK1P19419 428 aa23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 ERVK11-1P61568 191 aa23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 SAXO1Q8IYX7 474 aa23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 CMTM4Q8IZR5 234 aa23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 POC1AQ8NBT0 407 aa23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 EMG1Q92979 244 aaKnown RBP23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 METTL1Q9UBP6 276 aaKnown RBP23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 A0A0A6YYD4 124 aa23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 DISC1C4P0D8 188 aa23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 NXPH2O95156 264 aa23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 TAS2R60P59551 318 aa23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 GSG1LQ6UXU4 331 aa23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 TSNAXQ99598 290 aaKnown RBP23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 CMSS1Q9BQ75 279 aaKnown RBP23.09■■□□□ 1.29
SMARCD3-201ENST00000262188 GLRA1P23415 457 aa23.08■■□□□ 1.29
SMARCD3-201ENST00000262188 CEBPDP49716 269 aaPredicted RBP23.08■■□□□ 1.29
SMARCD3-201ENST00000262188 ALKAL2Q6UX46 152 aa23.08■■□□□ 1.29
SMARCD3-201ENST00000262188 IZUMO1Q8IYV9 350 aa23.08■■□□□ 1.29
SMARCD3-201ENST00000262188 RNASE11Q8TAA1 199 aaKnown RBP23.08■■□□□ 1.29
SMARCD3-201ENST00000262188 TMEM59Q9BXS4 323 aa23.08■■□□□ 1.29
SMARCD3-201ENST00000262188 RNF7Q9UBF6 113 aa23.08■■□□□ 1.29
SMARCD3-201ENST00000262188 APCP25054 2843 aa23.08■■□□□ 1.28
SMARCD3-201ENST00000262188 OR2A4O95047 310 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 UBBP0CG47 229 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 PITPNBP48739 271 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 MOGAT2Q3SYC2 334 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 TMUB2Q71RG4 321 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 BPIFCQ8NFQ6 507 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 KCNG3Q8TAE7 436 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 Q8TCH9 128 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 OR2A7Q96R45 310 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 LPAR5Q9H1C0 372 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 TMEM106BQ9NUM4 274 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 IL36GQ9NZH8 169 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 SLC31A2O15432 143 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 SEC61A1P61619 476 aaKnown RBP23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 DYRK1AQ13627 763 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 FAM58AQ8N1B3 248 aa23.07■■□□□ 1.28
SMARCD3-201ENST00000262188 OSR2Q8N2R0 312 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms