RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 MiipA2A7Y5 387 aa11.1□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Thbs3Q05895 956 aa11.1□□□□□ -0.63
Rnf4-201ENSMUST00000030992 MamstrQ0ZCJ7 421 aa11.1□□□□□ -0.63
Rnf4-201ENSMUST00000030992 6430531B16RikQ3V2J1 307 aa11.1□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Rnase12Q5GAM8 145 aa11.1□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Lcn12Q6JVL5 193 aa11.1□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Rnf144bQ8BKD6 301 aa11.1□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Ntng2Q8R4F1 589 aaKnown RBP11.1□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Iqcf5Q9DAL7 148 aa11.1□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Gm11361A0A1Y7VKY1 152 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Atxn7l3A2AWT3 347 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 A630095N17RikJ3KMM7 116 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 C3ar1O09047 477 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Ntsr1O88319 424 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 FauP35545 74 aaKnown RBP11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Rps18P62270 152 aaKnown RBP11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Lyg2Q3V1I0 213 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 NppcQ61839 126 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Rab35Q6PHN9 201 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr32Q7TQZ0 308 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Coq3Q8BMS4 370 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Lrtm1Q8BXQ3 356 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Fam25cQ8CF02 89 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr1201Q8VGF5 307 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 PpifQ99KR7 206 aaKnown RBP11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Snu13Q9D0T1 128 aaKnown RBP11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 9230110F15RikQ9D262 117 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Asb12Q9D738 308 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Ctag2Q9D9S4 219 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Cir1Q9DA19 450 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr1289A0A288CFY5 326 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr1158A2BHP7 313 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Vmn1r173E9Q8V7 313 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Rab18P35293 206 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 PtgfrP43117 366 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Cd7P50283 210 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Bcl2l15Q08ED0 167 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Gm11110Q3U4K9 109 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Gnb3Q61011 340 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Esco2Q8CIB9 592 aaKnown RBP11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 CenpoQ8K015 298 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr777Q8VFH3 311 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Sgo1Q9CXH7 517 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Ube2v2Q9D2M8 145 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Dmrtc1c1Q9D410 238 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Irak1bp1Q9ESJ7 259 aa11.09□□□□□ -0.63
Rnf4-201ENSMUST00000030992 Olfr455A0A0B4J1M2 317 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Pusl1A2ADA5 291 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 4931429L15RikE9PVU2 379 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Gm21721J3QMK7 227 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 P2rx6O54803 389 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 PipP02816 146 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Olfr1442Q0VEV7 312 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Nxph2Q61199 261 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Hes3Q61657 175 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 S100a15aQ6S5I3 108 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Olfr285Q7TS17 319 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Mrpl48Q8JZS9 211 aaKnown RBP11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Pttg1ipQ8R143 174 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Bcdin3dQ91YP1 285 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Ms4a4dQ99N05 225 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Mrps30Q9D0G0 442 aaKnown RBP11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Mcts1Q9DB27 181 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Emc9Q9DB76 206 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Syt9Q9R0N9 491 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Fxyd1Q9Z239 92 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Gm6890A2BG94 208 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Igh-3P01867 404 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Hist1h1dP43277 221 aaKnown RBP11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Defb4P82019 63 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Rasl12Q08AT1 266 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Mpzl1Q3TEW6 270 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Irgm1Q60766 409 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 DhhQ61488 396 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Ceacam14Q78Y72 263 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Fam117aQ7TNF9 451 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Dcaf12Q8BGZ3 453 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Prss27Q8BJR6 328 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 CenpxQ8C4X1 78 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Lrrtm1Q8K377 522 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Il34Q8R1R4 235 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Rcc1Q8VE37 421 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Olfr995Q8VF74 315 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Olfr1301Q8VGE7 312 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Thyn1Q91YJ3 226 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Tmem51Q99LG1 249 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Chmp1b2Q9CQD4 199 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Lamtor5Q9D1L9 91 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 1700020A23RikQ9DA59 131 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 SrfQ9JM73 504 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Naa10Q9QY36 235 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Mmp17Q9R0S3 578 aa11.08□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Gm34653A0A1L1SR01 368 aa11.07□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Gm5901D3YVJ1 333 aa11.07□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Vmn1r167G3UW71 315 aa11.07□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Tex45G3XA23 500 aa11.07□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Gm5458L7N219 204 aa11.07□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Sc5dO88822 299 aa11.07□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Klk1b1P00755 261 aa11.07□□□□□ -0.64
Rnf4-201ENSMUST00000030992 Cr2P19070 1025 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms