RNA–Protein interactions for RNA: ENST00000638802.1

PAX6-240, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-240	ENST00000638802	RAB22A	Q9UL26	194 aa		11.95	□□□□□ -0.5
PAX6-240	ENST00000638802	TMEM272	A0A1B0GTI8	110 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	MCRIP1	C9JLW8	97 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802		M0R1W7	72 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	LDLRAD4	O15165	306 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	CRLF1	O75462	422 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	GABARAP	O95166	117 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	IL1A	P01583	271 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	FUT3	P21217	361 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	SERPINB10	P48595	397 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	VBP1	P61758	197 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	NCS1	P62166	190 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	RBM39	Q14498	530 aa	Known RBP	11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	ZNF273	Q14593	569 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	RAB12	Q6IQ22	244 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	METAP1D	Q6UB28	335 aa	Predicted RBP	11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	SLC16A12	Q6ZSM3	486 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	CROCCP3	Q8IVE0	287 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	UPRT	Q96BW1	309 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	NEDD4L	Q96PU5	975 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	NAA50	Q9GZZ1	169 aa	Known RBP	11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	SIRPD	Q9H106	197 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	ING3	Q9NXR8	418 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	PEX16	Q9Y5Y5	336 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	LINC00312	Q9Y6C7	94 aa		11.94	□□□□□ -0.5
PAX6-240	ENST00000638802	SVEP1	Q4LDE5	3571 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802		A0A0B4J203	849 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	hCG_1809904	A0A1W2PP81	198 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802		A0A1W2PPE2	198 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802		A0A1W2PR64	198 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802		A0A1W2PRV1	198 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	TMEM127	O75204	238 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	PDCD6	O75340	191 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	GLA	P06280	429 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	MMP9	P14780	707 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	GLIPR1	P48060	266 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	PAX5	Q02548	391 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	FAM189A2	Q15884	450 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	IDNK	Q5T6J7	187 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	BRICD5	Q6PL45	260 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	C1orf122	Q6ZSJ8	110 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	TRAPPC6B	Q86SZ2	158 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	COQ2	Q96H96	371 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	NICN1	Q9BSH3	213 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	LPAR5	Q9H1C0	372 aa		11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	FN1	P02751	2386 aa	Known RBP	11.93	□□□□□ -0.5
PAX6-240	ENST00000638802	TRGV10	A0A0A0MS01	117 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	ODAM	A1E959	279 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	SRD5A1	P18405	259 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	RAB6A	P20340	208 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	RPS19	P39019	145 aa	Known RBP	11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	CTF1	Q16619	201 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	NKAPL	Q5M9Q1	402 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	SIGIRR	Q6IA17	410 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	VMO1	Q7Z5L0	202 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	OR56B1	Q8NGI3	324 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	PLPPR1	Q8TBJ4	325 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	PTX4	Q96A99	478 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	ZNF714	Q96N38	554 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	TBX15	Q96SF7	602 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	NCOR1P1	Q9H4R4	102 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	METTL8	Q9H825	291 aa	Known RBP	11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	OR6C3	Q9NZP0	311 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	DSCAML1	Q8TD84	2053 aa		11.92	□□□□□ -0.5
PAX6-240	ENST00000638802	MEIKIN	A0A087WXM9	373 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	TMEM30CP	A0ZSE6	113 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	MEX3A	A1L020	520 aa	Known RBP	11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	ZNF728	P0DKX0	622 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	CCL3L1	P16619	93 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	BLVRB	P30043	206 aa	Predicted RBP	11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	VEGFC	P49767	419 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	SCAND1	P57086	179 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	SCGB2A2	Q13296	93 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	SLC35E4	Q6ICL7	350 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	USP43	Q70EL4	1123 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	TCF23	Q7RTU1	214 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	FAM89B	Q8N5H3	189 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802		Q8N7P7	452 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	SIRT7	Q9NRC8	400 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	ETAA1	Q9NY74	926 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	KIF25	Q9UIL4	384 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802		A0A0A6YYD4	124 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	TRAV40	A0A0B4J280	105 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	METTL21EP	A6NDL7	271 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	NOL3	O60936	208 aa	Known RBP	11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	CA11	O75493	328 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	SNRPB	P14678	240 aa	Known RBP	11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	CHAT	P28329	748 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	EFNB2	P52799	333 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	TMBIM6	P55061	237 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	PLA2G7	Q13093	441 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	GPR157	Q5UAW9	335 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	ZNF565	Q8N9K5	539 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	LGALS14	Q8TCE9	139 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	RAB2B	Q8WUD1	216 aa		11.91	□□□□□ -0.5
PAX6-240	ENST00000638802	CORO2A	Q92828	525 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms